Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CKAP2Q8WWK9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 AC006116.8-202ENST00000587620 1550 ntBASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 HCG11-201ENST00000411553 5696 ntBASIC18.45■□□□□ 0.54
CKAP2Q8WWK9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 AC133552.2-202ENST00000575694 574 ntBASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 AC022211.2-201ENST00000585075 2527 ntBASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 KRT8P41-201ENST00000533985 1514 ntBASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CKAP2Q8WWK9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms