Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF139Q8WU17 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF139Q8WU17 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF139Q8WU17 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF139Q8WU17 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF139Q8WU17 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RNF139Q8WU17 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF139Q8WU17 AL031598.1-201ENST00000561511 1773 ntBASIC19.49■□□□□ 0.71
RNF139Q8WU17 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF139Q8WU17 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF139Q8WU17 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF139Q8WU17 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF139Q8WU17 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF139Q8WU17 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RNF139Q8WU17 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RNF139Q8WU17 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF139Q8WU17 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF139Q8WU17 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF139Q8WU17 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF139Q8WU17 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.49■□□□□ 0.71
RNF139Q8WU17 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF139Q8WU17 AL441883.1-201ENST00000566170 1045 ntBASIC19.49■□□□□ 0.71
RNF139Q8WU17 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF139Q8WU17 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
RNF139Q8WU17 AC112497.1-201ENST00000624824 639 ntBASIC19.49■□□□□ 0.71
RNF139Q8WU17 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RNF139Q8WU17 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF139Q8WU17 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF139Q8WU17 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF139Q8WU17 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF139Q8WU17 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF139Q8WU17 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF139Q8WU17 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF139Q8WU17 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF139Q8WU17 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
RNF139Q8WU17 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF139Q8WU17 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF139Q8WU17 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF139Q8WU17 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF139Q8WU17 AC034236.2-201ENST00000606662 1610 ntBASIC19.48■□□□□ 0.71
RNF139Q8WU17 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF139Q8WU17 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RNF139Q8WU17 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF139Q8WU17 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF139Q8WU17 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF139Q8WU17 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF139Q8WU17 KRT18P23-201ENST00000435622 1283 ntBASIC19.48■□□□□ 0.71
RNF139Q8WU17 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF139Q8WU17 AC063952.2-201ENST00000498792 1227 ntBASIC19.48■□□□□ 0.71
RNF139Q8WU17 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF139Q8WU17 GCSHP2-201ENST00000560971 527 ntBASIC19.48■□□□□ 0.71
RNF139Q8WU17 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF139Q8WU17 AC024243.1-201ENST00000609234 778 ntBASIC19.48■□□□□ 0.71
RNF139Q8WU17 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF139Q8WU17 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF139Q8WU17 AL020996.1-203ENST00000536896 2307 ntBASIC19.48■□□□□ 0.71
RNF139Q8WU17 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RNF139Q8WU17 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF139Q8WU17 AL357033.4-201ENST00000617703 1807 ntBASIC19.48■□□□□ 0.71
RNF139Q8WU17 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF139Q8WU17 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF139Q8WU17 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF139Q8WU17 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
RNF139Q8WU17 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF139Q8WU17 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF139Q8WU17 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF139Q8WU17 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
RNF139Q8WU17 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RNF139Q8WU17 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF139Q8WU17 AC020763.4-201ENST00000623414 4170 ntBASIC19.47■□□□□ 0.71
RNF139Q8WU17 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RNF139Q8WU17 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RNF139Q8WU17 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF139Q8WU17 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF139Q8WU17 HOMER2P1-201ENST00000455653 964 ntBASIC19.47■□□□□ 0.71
RNF139Q8WU17 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 AC022616.7-201ENST00000525383 220 ntBASIC19.47■□□□□ 0.71
RNF139Q8WU17 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF139Q8WU17 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.47■□□□□ 0.71
RNF139Q8WU17 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF139Q8WU17 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.47■□□□□ 0.71
RNF139Q8WU17 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
RNF139Q8WU17 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RNF139Q8WU17 KRT8P7-201ENST00000533003 1432 ntBASIC19.47■□□□□ 0.71
RNF139Q8WU17 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms