Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 AC026471.5-201ENST00000615068 467 ntBASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 AL357033.4-201ENST00000617703 1807 ntBASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 REXO1L10P-201ENST00000615707 1290 ntBASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 REXO1L12P-201ENST00000622156 912 ntBASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 TMEM191A-211ENST00000637163 1067 ntBASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP1Q8TDR0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 CRYGFP-201ENST00000418459 633 ntBASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 Z99916.2-201ENST00000604037 246 ntBASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP1Q8TDR0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 AL499627.1-201ENST00000569373 2188 ntBASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 AC008550.1-201ENST00000511500 884 ntBASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms