Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.98■■□□□ 1.11
NKX2-3Q8TAU0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
NKX2-3Q8TAU0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
NKX2-3Q8TAU0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.98■■□□□ 1.11
NKX2-3Q8TAU0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NKX2-3Q8TAU0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.98■■□□□ 1.11
NKX2-3Q8TAU0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NKX2-3Q8TAU0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.98■■□□□ 1.11
NKX2-3Q8TAU0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.98■■□□□ 1.11
NKX2-3Q8TAU0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 KRT8P10-201ENST00000450021 1447 ntBASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 KRT8P50-201ENST00000562022 1438 ntBASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NKX2-3Q8TAU0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.96■■□□□ 1.11
NKX2-3Q8TAU0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NKX2-3Q8TAU0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NKX2-3Q8TAU0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NKX2-3Q8TAU0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.96■■□□□ 1.11
NKX2-3Q8TAU0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.96■■□□□ 1.11
NKX2-3Q8TAU0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
NKX2-3Q8TAU0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
NKX2-3Q8TAU0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NKX2-3Q8TAU0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.96■■□□□ 1.11
NKX2-3Q8TAU0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NKX2-3Q8TAU0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
NKX2-3Q8TAU0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.96■■□□□ 1.11
NKX2-3Q8TAU0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NKX2-3Q8TAU0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.96■■□□□ 1.11
NKX2-3Q8TAU0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
NKX2-3Q8TAU0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 HYMAI.1-201ENST00000620949 238 ntBASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 AC126763.1-201ENST00000552015 2118 ntBASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.95■■□□□ 1.1
NKX2-3Q8TAU0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 AL845331.1-201ENST00000424978 1190 ntBASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 AC083849.1-201ENST00000615227 514 ntBASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 AC079602.3-201ENST00000623931 403 ntBASIC21.94■■□□□ 1.1
NKX2-3Q8TAU0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms