Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 TSPY20P-201ENST00000450910 630 ntBASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 CKBP1-201ENST00000565489 1086 ntBASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 AC073195.1-201ENST00000607241 877 ntBASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 FAM197Y1-201ENST00000421178 764 ntBASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 FAM201B-201ENST00000458407 597 ntBASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 RARRES2P10-201ENST00000564312 460 ntBASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 AC026271.3-201ENST00000571884 352 ntBASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 MIR6786-201ENST00000616843 113 ntBASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLHC1Q8NHS4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 B3GAT3P1-201ENST00000471720 806 ntBASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 AC130371.2-201ENST00000619443 611 ntBASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLHC1Q8NHS4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLHC1Q8NHS4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLHC1Q8NHS4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLHC1Q8NHS4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.83■□□□□ 0.45
CLHC1Q8NHS4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLHC1Q8NHS4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLHC1Q8NHS4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms