Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 LINC02362-203ENST00000617323 2044 ntTSL 2 BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SVIPQ8NHG7 AP003469.4-201ENST00000565617 2825 ntBASIC11.64□□□□□ -0.55
SVIPQ8NHG7 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 AC008609.1-202ENST00000501818 2686 ntTSL 2 BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 PCDHB17P-202ENST00000623466 3066 ntBASIC11.63□□□□□ -0.55
SVIPQ8NHG7 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 PSEN1-202ENST00000357710 2776 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 RSPH10B2-201ENST00000297186 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 RSPH10B-201ENST00000337579 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 AC099521.3-201ENST00000624251 2938 ntBASIC11.63□□□□□ -0.55
SVIPQ8NHG7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SVIPQ8NHG7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 APOBEC3D-201ENST00000216099 2528 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 MIR600HG-201ENST00000449175 5984 ntBASIC11.62□□□□□ -0.55
SVIPQ8NHG7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 AC022188.1-201ENST00000620960 1664 ntBASIC11.62□□□□□ -0.55
SVIPQ8NHG7 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SVIPQ8NHG7 AL031598.1-201ENST00000561511 1773 ntBASIC11.62□□□□□ -0.55
SVIPQ8NHG7 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.61□□□□□ -0.55
SVIPQ8NHG7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SVIPQ8NHG7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms