Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC120498.9-201ENST00000339021 3867 ntBASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 PCDHAC2-203ENST00000615316 3011 ntBASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 AC002310.6-201ENST00000624451 1377 ntBASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 AC254562.1-201ENST00000417586 456 ntBASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 TP73-AS1-210ENST00000637775 1455 ntBASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 AC092667.1-201ENST00000434301 2586 ntBASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC168Q8NDH2 RPS2P28-201ENST00000314255 741 ntBASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 MIR3180-4-201ENST00000582223 153 ntBASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 AC025062.2-201ENST00000605477 670 ntBASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 AL162377.1-201ENST00000618844 1793 ntBASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 AC093028.1-201ENST00000622998 982 ntBASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC168Q8NDH2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC168Q8NDH2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC168Q8NDH2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
CCDC168Q8NDH2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC168Q8NDH2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms