Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 AP005242.2-201ENST00000580065 1175 ntBASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 AL354751.1-201ENST00000412768 1863 ntBASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 AL390961.4-201ENST00000623958 2535 ntBASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
LSMEM1Q8N8F7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSMEM1Q8N8F7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.02■□□□□ 0.32
LSMEM1Q8N8F7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.02■□□□□ 0.32
LSMEM1Q8N8F7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LSMEM1Q8N8F7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
LSMEM1Q8N8F7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSMEM1Q8N8F7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LSMEM1Q8N8F7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSMEM1Q8N8F7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSMEM1Q8N8F7 AL023284.2-201ENST00000405850 579 ntBASIC17.02■□□□□ 0.32
LSMEM1Q8N8F7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LSMEM1Q8N8F7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.02■□□□□ 0.32
LSMEM1Q8N8F7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.02■□□□□ 0.32
LSMEM1Q8N8F7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.02■□□□□ 0.32
LSMEM1Q8N8F7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.02■□□□□ 0.32
LSMEM1Q8N8F7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LSMEM1Q8N8F7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LSMEM1Q8N8F7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
LSMEM1Q8N8F7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
LSMEM1Q8N8F7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.02■□□□□ 0.31
LSMEM1Q8N8F7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LSMEM1Q8N8F7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 AC012313.1-201ENST00000593393 3059 ntBASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 MIR564-202ENST00000385049 94 ntBASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 MIR718-201ENST00000390190 70 ntBASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 GPAT2P1-201ENST00000444924 1672 ntBASIC17.01■□□□□ 0.31
LSMEM1Q8N8F7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 AIRN-201ENST00000601203 4374 ntBASIC17■□□□□ 0.31
LSMEM1Q8N8F7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 MCCD1P1-208ENST00000445732 328 ntBASIC17■□□□□ 0.31
LSMEM1Q8N8F7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 AC008550.1-201ENST00000511500 884 ntBASIC17■□□□□ 0.31
LSMEM1Q8N8F7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 AP003071.4-201ENST00000562276 1284 ntBASIC17■□□□□ 0.31
LSMEM1Q8N8F7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms