Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 AL136038.3-201ENST00000561909 1096 ntBASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 LINC01311-201ENST00000565162 1445 ntBASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ARHGEF39Q8N4T4 AL391807.1-203ENST00000604392 2365 ntBASIC17.52■□□□□ 0.39
ARHGEF39Q8N4T4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ARHGEF39Q8N4T4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
ARHGEF39Q8N4T4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ARHGEF39Q8N4T4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ARHGEF39Q8N4T4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ARHGEF39Q8N4T4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ARHGEF39Q8N4T4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 PVRIG2P-201ENST00000435460 978 ntBASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 ZNF444P1-201ENST00000559497 298 ntBASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARHGEF39Q8N4T4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 VENTXP5-201ENST00000523979 775 ntBASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 AL136038.4-201ENST00000603606 1261 ntBASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.5■□□□□ 0.39
ARHGEF39Q8N4T4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 SDHAP2-201ENST00000455183 2001 ntBASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 AC093503.3-201ENST00000624917 2352 ntBASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF39Q8N4T4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 AC005332.1-201ENST00000577698 1310 ntBASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 MIR149-201ENST00000384879 89 ntBASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms