Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
XRN1Q8IZH2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC25.74■■□□□ 1.71
XRN1Q8IZH2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
XRN1Q8IZH2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.73■■□□□ 1.71
XRN1Q8IZH2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC25.73■■□□□ 1.71
XRN1Q8IZH2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
XRN1Q8IZH2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
XRN1Q8IZH2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
XRN1Q8IZH2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC25.73■■□□□ 1.71
XRN1Q8IZH2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC25.73■■□□□ 1.71
XRN1Q8IZH2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC25.73■■□□□ 1.71
XRN1Q8IZH2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC25.73■■□□□ 1.71
XRN1Q8IZH2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
XRN1Q8IZH2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
XRN1Q8IZH2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
XRN1Q8IZH2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
XRN1Q8IZH2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
XRN1Q8IZH2 AC104109.2-201ENST00000602919 1418 ntBASIC25.73■■□□□ 1.71
XRN1Q8IZH2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
XRN1Q8IZH2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
XRN1Q8IZH2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
XRN1Q8IZH2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC25.72■■□□□ 1.71
XRN1Q8IZH2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC25.72■■□□□ 1.71
XRN1Q8IZH2 RPSAP43-201ENST00000402237 625 ntBASIC25.72■■□□□ 1.71
XRN1Q8IZH2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
XRN1Q8IZH2 UPF3AP3-201ENST00000420996 769 ntBASIC25.72■■□□□ 1.71
XRN1Q8IZH2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
XRN1Q8IZH2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
XRN1Q8IZH2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC25.72■■□□□ 1.71
XRN1Q8IZH2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC25.72■■□□□ 1.71
XRN1Q8IZH2 Z83851.2-201ENST00000609564 659 ntBASIC25.72■■□□□ 1.71
XRN1Q8IZH2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC25.72■■□□□ 1.71
XRN1Q8IZH2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
XRN1Q8IZH2 AC141586.3-201ENST00000562166 1838 ntBASIC25.72■■□□□ 1.71
XRN1Q8IZH2 AC125437.2-201ENST00000625180 2167 ntBASIC25.72■■□□□ 1.71
XRN1Q8IZH2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC25.72■■□□□ 1.71
XRN1Q8IZH2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
XRN1Q8IZH2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
XRN1Q8IZH2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
XRN1Q8IZH2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
XRN1Q8IZH2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 AL356488.2-201ENST00000602755 427 ntBASIC25.71■■□□□ 1.71
XRN1Q8IZH2 AC025062.2-201ENST00000605477 670 ntBASIC25.71■■□□□ 1.71
XRN1Q8IZH2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 AL591424.1-201ENST00000442569 1213 ntBASIC25.71■■□□□ 1.71
XRN1Q8IZH2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC25.71■■□□□ 1.71
XRN1Q8IZH2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
XRN1Q8IZH2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
XRN1Q8IZH2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
XRN1Q8IZH2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC25.7■■□□□ 1.71
XRN1Q8IZH2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC25.7■■□□□ 1.71
XRN1Q8IZH2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
XRN1Q8IZH2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.71
XRN1Q8IZH2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
XRN1Q8IZH2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC25.7■■□□□ 1.7
XRN1Q8IZH2 NFYC-AS1-201ENST00000606277 1687 ntBASIC25.7■■□□□ 1.7
XRN1Q8IZH2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
XRN1Q8IZH2 MIR149-201ENST00000384879 89 ntBASIC25.7■■□□□ 1.7
XRN1Q8IZH2 YBX2P1-201ENST00000394192 760 ntBASIC25.7■■□□□ 1.7
XRN1Q8IZH2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC25.7■■□□□ 1.7
XRN1Q8IZH2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC25.7■■□□□ 1.7
XRN1Q8IZH2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC25.7■■□□□ 1.7
XRN1Q8IZH2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC25.7■■□□□ 1.7
XRN1Q8IZH2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC25.7■■□□□ 1.7
XRN1Q8IZH2 AC011467.2-201ENST00000598425 242 ntBASIC25.7■■□□□ 1.7
XRN1Q8IZH2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
XRN1Q8IZH2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
XRN1Q8IZH2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
XRN1Q8IZH2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
XRN1Q8IZH2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC25.7■■□□□ 1.7
XRN1Q8IZH2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC25.7■■□□□ 1.7
XRN1Q8IZH2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
XRN1Q8IZH2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
XRN1Q8IZH2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC25.7■■□□□ 1.7
XRN1Q8IZH2 AL024508.2-201ENST00000607749 1894 ntBASIC25.69■■□□□ 1.7
XRN1Q8IZH2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
XRN1Q8IZH2 RPS2P1-201ENST00000434010 821 ntBASIC25.69■■□□□ 1.7
XRN1Q8IZH2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC25.69■■□□□ 1.7
XRN1Q8IZH2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
XRN1Q8IZH2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms