Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.39■□□□□ 0.54
CPNE9Q8IYJ1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.39■□□□□ 0.54
CPNE9Q8IYJ1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CPNE9Q8IYJ1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.39■□□□□ 0.54
CPNE9Q8IYJ1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.54
CPNE9Q8IYJ1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CPNE9Q8IYJ1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 MIR1238-201ENST00000408483 83 ntBASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 KRT17P2-201ENST00000300992 1314 ntBASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE9Q8IYJ1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 MCCD1P1-208ENST00000445732 328 ntBASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 TSPY15P-201ENST00000457163 923 ntBASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 FITM1-202ENST00000559294 800 ntBASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 MIR4674-201ENST00000582457 87 ntBASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 AL133373.2-201ENST00000623187 2828 ntBASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CPNE9Q8IYJ1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 AC106820.2-201ENST00000563775 3264 ntBASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 PCDHB18P-201ENST00000524813 2368 ntBASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.37■□□□□ 0.53
CPNE9Q8IYJ1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms