Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 FAM210CP-201ENST00000445714 574 ntBASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 AL512604.3-201ENST00000569583 964 ntBASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC24.6■■□□□ 1.53
CCDC146Q8IYE0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 BX664615.1-201ENST00000443558 458 ntBASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC146Q8IYE0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC146Q8IYE0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC146Q8IYE0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC146Q8IYE0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC24.58■■□□□ 1.53
CCDC146Q8IYE0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC24.58■■□□□ 1.53
CCDC146Q8IYE0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC146Q8IYE0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.58■■□□□ 1.53
CCDC146Q8IYE0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC24.58■■□□□ 1.53
CCDC146Q8IYE0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC24.58■■□□□ 1.53
CCDC146Q8IYE0 NEK4P2-201ENST00000580004 1012 ntBASIC24.58■■□□□ 1.53
CCDC146Q8IYE0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC24.58■■□□□ 1.53
CCDC146Q8IYE0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC24.58■■□□□ 1.53
CCDC146Q8IYE0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC24.58■■□□□ 1.53
CCDC146Q8IYE0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC146Q8IYE0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.52
CCDC146Q8IYE0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
CCDC146Q8IYE0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
CCDC146Q8IYE0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 CYP51A1P1-201ENST00000492267 1507 ntBASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 ANKRD20A18P-201ENST00000359341 492 ntBASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 HOXB1-202ENST00000577092 1414 ntBASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC146Q8IYE0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 MYLKP1-201ENST00000509077 1580 ntBASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 AK4P3-201ENST00000418260 669 ntBASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms