Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 AC007322.4-201ENST00000509611 723 ntBASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYSMD2Q8IV50 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 RARRES2P4-201ENST00000514074 484 ntBASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
LYSMD2Q8IV50 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 AC005837.3-201ENST00000612163 286 ntBASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 OR6D1P-202ENST00000641007 5290 ntBASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
LYSMD2Q8IV50 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD2Q8IV50 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD2Q8IV50 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LYSMD2Q8IV50 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD2Q8IV50 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.3■□□□□ 0.2
LYSMD2Q8IV50 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.3■□□□□ 0.2
LYSMD2Q8IV50 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.3■□□□□ 0.2
LYSMD2Q8IV50 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD2Q8IV50 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD2Q8IV50 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.3■□□□□ 0.2
LYSMD2Q8IV50 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LYSMD2Q8IV50 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms