Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 FEM1AP3-201ENST00000403722 1741 ntBASIC17.42■□□□□ 0.38
CCDC71Q8IV32 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 MESTP1-201ENST00000404287 994 ntBASIC17.42■□□□□ 0.38
CCDC71Q8IV32 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.42■□□□□ 0.38
CCDC71Q8IV32 SLC25A3P1-201ENST00000443844 931 ntBASIC17.42■□□□□ 0.38
CCDC71Q8IV32 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 FSCN1P1-201ENST00000568912 1481 ntBASIC17.42■□□□□ 0.38
CCDC71Q8IV32 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71Q8IV32 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.41■□□□□ 0.38
CCDC71Q8IV32 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 AL445675.2-201ENST00000620291 557 ntBASIC17.41■□□□□ 0.38
CCDC71Q8IV32 AC083906.6-201ENST00000641366 219 ntBASIC17.41■□□□□ 0.38
CCDC71Q8IV32 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71Q8IV32 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 TUBB8P6-201ENST00000436895 1288 ntBASIC17.4■□□□□ 0.38
CCDC71Q8IV32 YBX1P10-201ENST00000444752 975 ntBASIC17.4■□□□□ 0.38
CCDC71Q8IV32 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 AC011506.1-201ENST00000474329 610 ntBASIC17.4■□□□□ 0.38
CCDC71Q8IV32 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CCDC71Q8IV32 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC71Q8IV32 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms