Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 AL162412.1-201ENST00000567129 965 ntBASIC15.46■□□□□ 0.07
ZNF546Q86UE3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
ZNF546Q86UE3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ZNF546Q86UE3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ZNF546Q86UE3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
ZNF546Q86UE3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
ZNF546Q86UE3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
ZNF546Q86UE3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
ZNF546Q86UE3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
ZNF546Q86UE3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.45■□□□□ 0.06
ZNF546Q86UE3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.44■□□□□ 0.06
ZNF546Q86UE3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.44■□□□□ 0.06
ZNF546Q86UE3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.44■□□□□ 0.06
ZNF546Q86UE3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms