Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13BQ7Z7G8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13BQ7Z7G8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13BQ7Z7G8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13BQ7Z7G8 KRT18P41-201ENST00000518924 1277 ntBASIC11.46□□□□□ -0.58
VPS13BQ7Z7G8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.46□□□□□ -0.58
VPS13BQ7Z7G8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC11.46□□□□□ -0.58
VPS13BQ7Z7G8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.58
VPS13BQ7Z7G8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13BQ7Z7G8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
VPS13BQ7Z7G8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
VPS13BQ7Z7G8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13BQ7Z7G8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13BQ7Z7G8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13BQ7Z7G8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 AC010327.4-202ENST00000591484 748 ntBASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 AC134684.3-201ENST00000641758 218 ntBASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 FAM197Y8-203ENST00000450145 560 ntBASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 AC140113.2-201ENST00000604370 208 ntBASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 BID-204ENST00000399767 2129 ntTSL 2 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 LINC01521-201ENST00000504184 1943 ntBASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13BQ7Z7G8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 AC034236.2-201ENST00000606662 1610 ntBASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 AC096582.2-201ENST00000510860 516 ntBASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13BQ7Z7G8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms