Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.497e-8■□□□□ 11.2
SND1Q7KZF4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.27e-8■□□□□ 11.2
SND1Q7KZF4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.29■■□□□ 1.324e-14■□□□□ 11.2
SND1Q7KZF4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.89■□□□□ 0.454e-14■□□□□ 11.2
SND1Q7KZF4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.46e-7■□□□□ 11.2
SND1Q7KZF4 MYL12A-208ENST00000580353 565 ntTSL 216.51■□□□□ 0.234e-14■□□□□ 11.2
SND1Q7KZF4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.154e-14■□□□□ 11.2
SND1Q7KZF4 TCP1-211ENST00000539756 780 ntTSL 315.78■□□□□ 0.124e-14■□□□□ 11.2
SND1Q7KZF4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.076e-7■□□□□ 11.2
SND1Q7KZF4 CD68-204ENST00000584502 582 ntTSL 213.79□□□□□ -0.26e-7■□□□□ 11.2
SND1Q7KZF4 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC13.73□□□□□ -0.214e-14■□□□□ 11.2
SND1Q7KZF4 TCP1-218ENST00000546204 566 ntTSL 29.49□□□□□ -0.894e-14■□□□□ 11.2
SND1Q7KZF4 MYL12A-203ENST00000577510 567 ntTSL 25.36□□□□□ -1.554e-14■□□□□ 11.2
SND1Q7KZF4 CYP27A1-204ENST00000466602 1210 ntTSL 223.77■■□□□ 1.41e-11■□□□□ 11.2
SND1Q7KZF4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.151e-11■□□□□ 11.2
SND1Q7KZF4 CYP27A1-205ENST00000494263 2566 ntTSL 219.96■□□□□ 0.791e-11■□□□□ 11.2
SND1Q7KZF4 CYP27A1-203ENST00000445971 903 ntTSL 518.16■□□□□ 0.51e-11■□□□□ 11.2
SND1Q7KZF4 GGCX-208ENST00000481541 600 ntTSL 211.09□□□□□ -0.633e-9■□□□□ 11.2
SND1Q7KZF4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 03e-6■□□□□ 11.2
SND1Q7KZF4 ATP1A1-206ENST00000463382 584 ntTSL 28.49□□□□□ -1.052e-8■□□□□ 11.2
SND1Q7KZF4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.5■□□□□ 0.872e-8■□□□□ 11.2
SND1Q7KZF4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.112e-8■□□□□ 11.2
SND1Q7KZF4 ATP5A1-210ENST00000589869 910 ntTSL 315.25■□□□□ 0.032e-8■□□□□ 11.2
SND1Q7KZF4 ITIH3-201ENST00000416872 2220 ntTSL 2 BASIC12.6□□□□□ -0.392e-9■□□□□ 11.2
SND1Q7KZF4 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.892e-9■□□□□ 11.2
SND1Q7KZF4 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC9.43□□□□□ -0.92e-9■□□□□ 11.2
SND1Q7KZF4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.854e-9■□□□□ 11.2
SND1Q7KZF4 DHRS3-201ENST00000430996 826 ntTSL 319.54■□□□□ 0.724e-9■□□□□ 11.2
SND1Q7KZF4 DHRS3-202ENST00000464917 539 ntTSL 313.57□□□□□ -0.244e-9■□□□□ 11.2
SND1Q7KZF4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.46■□□□□ 0.392e-6■□□□□ 11.2
SND1Q7KZF4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.32e-6■□□□□ 11.2
SND1Q7KZF4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.152e-6■□□□□ 11.2
SND1Q7KZF4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.89□□□□□ -0.032e-6■□□□□ 11.2
SND1Q7KZF4 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.222e-6■□□□□ 11.2
SND1Q7KZF4 USP14-208ENST00000582707 1803 ntTSL 5 BASIC13.8□□□□□ -0.22e-9■□□□□ 11.2
SND1Q7KZF4 USP14-202ENST00000383589 2168 ntTSL 5 BASIC12.2□□□□□ -0.462e-9■□□□□ 11.2
SND1Q7KZF4 USP14-203ENST00000400266 1681 ntTSL 2 BASIC11.82□□□□□ -0.522e-9■□□□□ 11.2
SND1Q7KZF4 USP14-205ENST00000578942 3189 ntTSL 211.57□□□□□ -0.562e-9■□□□□ 11.2
SND1Q7KZF4 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.922e-9■□□□□ 11.2
SND1Q7KZF4 USP14-204ENST00000578786 1104 ntTSL 57.65□□□□□ -1.182e-9■□□□□ 11.2
SND1Q7KZF4 USP14-209ENST00000583119 578 ntTSL 55.3□□□□□ -1.562e-9■□□□□ 11.2
SND1Q7KZF4 MGAT1-213ENST00000506889 1104 ntTSL 223.92■■□□□ 1.424e-12■□□□□ 11.2
SND1Q7KZF4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.222e-8■□□□□ 11.2
SND1Q7KZF4 CCT3-206ENST00000368262 2048 ntTSL 215.72■□□□□ 0.112e-8■□□□□ 11.2
SND1Q7KZF4 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC14.75□□□□□ -0.052e-8■□□□□ 11.2
SND1Q7KZF4 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC14.7□□□□□ -0.062e-8■□□□□ 11.2
SND1Q7KZF4 CCT3-203ENST00000368258 1885 ntTSL 213.75□□□□□ -0.212e-8■□□□□ 11.2
SND1Q7KZF4 CCT3-205ENST00000368261 863 ntTSL 511.28□□□□□ -0.62e-8■□□□□ 11.2
SND1Q7KZF4 LCP1-204ENST00000442275 753 ntTSL 321.11■□□□□ 0.973e-12■□□□□ 11.1
SND1Q7KZF4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.792e-7■□□□□ 11.1
SND1Q7KZF4 QPRT-201ENST00000219771 913 ntTSL 218.48■□□□□ 0.552e-7■□□□□ 11.1
SND1Q7KZF4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.492e-7■□□□□ 11.1
SND1Q7KZF4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.392e-7■□□□□ 11.1
SND1Q7KZF4 AFMID-213ENST00000591538 487 ntTSL 317.36■□□□□ 0.372e-7■□□□□ 11.1
SND1Q7KZF4 TFR2-210ENST00000474947 1514 ntTSL 217.35■□□□□ 0.373e-12■□□□□ 11.1
SND1Q7KZF4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.2■□□□□ 0.342e-7■□□□□ 11.1
SND1Q7KZF4 DDX6-205ENST00000533239 738 ntTSL 217.09■□□□□ 0.332e-7■□□□□ 11.1
SND1Q7KZF4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.142e-7■□□□□ 11.1
SND1Q7KZF4 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC14.82□□□□□ -0.042e-7■□□□□ 11.1
SND1Q7KZF4 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.162e-7■□□□□ 11.1
SND1Q7KZF4 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.242e-7■□□□□ 11.1
SND1Q7KZF4 DCTN2-215ENST00000550201 1527 ntTSL 513.49□□□□□ -0.252e-7■□□□□ 11.1
SND1Q7KZF4 ERLIN2-207ENST00000519872 550 ntTSL 413.22□□□□□ -0.292e-7■□□□□ 11.1
SND1Q7KZF4 AFMID-209ENST00000589107 577 ntTSL 413.07□□□□□ -0.322e-7■□□□□ 11.1
SND1Q7KZF4 AFMID-212ENST00000591256 631 ntTSL 413.07□□□□□ -0.322e-7■□□□□ 11.1
SND1Q7KZF4 DCTN2-201ENST00000434715 1677 ntTSL 5 BASIC12.7□□□□□ -0.382e-7■□□□□ 11.1
SND1Q7KZF4 ZMYM3-209ENST00000489332 5723 ntTSL 512.6□□□□□ -0.392e-7■□□□□ 11.1
SND1Q7KZF4 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.42e-7■□□□□ 11.1
SND1Q7KZF4 EIF3A-202ENST00000462527 1192 ntTSL 212.12□□□□□ -0.472e-7■□□□□ 11.1
SND1Q7KZF4 DCTN2-212ENST00000549394 1439 ntTSL 212.11□□□□□ -0.472e-7■□□□□ 11.1
SND1Q7KZF4 AFMID-202ENST00000409257 1730 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.552e-7■□□□□ 11.1
SND1Q7KZF4 AFMID-208ENST00000588800 647 ntTSL 2 BASIC11.53□□□□□ -0.562e-7■□□□□ 11.1
SND1Q7KZF4 MFSD14B-202ENST00000428393 2275 ntTSL 5 BASIC11.49□□□□□ -0.572e-7■□□□□ 11.1
SND1Q7KZF4 ZMYM3-201ENST00000314425 5536 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.572e-7■□□□□ 11.1
SND1Q7KZF4 AFMID-204ENST00000586542 569 ntTSL 411.44□□□□□ -0.582e-7■□□□□ 11.1
SND1Q7KZF4 AFMID-206ENST00000587750 541 ntTSL 311.44□□□□□ -0.582e-7■□□□□ 11.1
SND1Q7KZF4 AFMID-207ENST00000588199 778 ntTSL 511.44□□□□□ -0.582e-7■□□□□ 11.1
SND1Q7KZF4 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC11.26□□□□□ -0.612e-7■□□□□ 11.1
SND1Q7KZF4 AFMID-211ENST00000589664 754 ntTSL 511.13□□□□□ -0.632e-7■□□□□ 11.1
SND1Q7KZF4 AFMID-215ENST00000592988 1605 ntTSL 210.69□□□□□ -0.72e-7■□□□□ 11.1
SND1Q7KZF4 DCTN2-209ENST00000548249 2061 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.72e-7■□□□□ 11.1
SND1Q7KZF4 DDX6-201ENST00000525082 1232 ntTSL 210.58□□□□□ -0.722e-7■□□□□ 11.1
SND1Q7KZF4 PTDSS1-205ENST00000518776 766 ntTSL 310.05□□□□□ -0.82e-6■□□□□ 11.1
SND1Q7KZF4 AFMID-203ENST00000585419 493 ntTSL 39.99□□□□□ -0.812e-7■□□□□ 11.1
SND1Q7KZF4 AFMID-214ENST00000591952 582 ntTSL 2 BASIC9.88□□□□□ -0.832e-7■□□□□ 11.1
SND1Q7KZF4 DCTN2-202ENST00000543672 1321 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.842e-7■□□□□ 11.1
SND1Q7KZF4 DCTN2-219ENST00000550988 795 ntTSL 49.69□□□□□ -0.862e-7■□□□□ 11.1
SND1Q7KZF4 DCTN2-218ENST00000550954 892 ntTSL 59.35□□□□□ -0.912e-7■□□□□ 11.1
SND1Q7KZF4 DCTN2-224ENST00000552390 842 ntTSL 58.57□□□□□ -1.042e-7■□□□□ 11.1
SND1Q7KZF4 DCTN2-210ENST00000548736 565 ntTSL 48.46□□□□□ -1.062e-7■□□□□ 11.1
SND1Q7KZF4 DDX6-204ENST00000531971 4373 ntTSL 37.84□□□□□ -1.152e-7■□□□□ 11.1
SND1Q7KZF4 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.192e-7■□□□□ 11.1
SND1Q7KZF4 DCTN2-223ENST00000551872 571 ntTSL 27.63□□□□□ -1.192e-7■□□□□ 11.1
SND1Q7KZF4 DCTN2-214ENST00000550086 384 ntTSL 57.39□□□□□ -1.232e-7■□□□□ 11.1
SND1Q7KZF4 CCT4-202ENST00000461370 388 ntTSL 27.16□□□□□ -1.262e-7■□□□□ 11.1
SND1Q7KZF4 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.94□□□□□ -1.32e-7■□□□□ 11.1
SND1Q7KZF4 DCTN2-205ENST00000546758 817 ntTSL 56.26□□□□□ -1.412e-7■□□□□ 11.1
SND1Q7KZF4 DCTN2-204ENST00000546670 580 ntTSL 36.13□□□□□ -1.432e-7■□□□□ 11.1
SND1Q7KZF4 DCTN2-222ENST00000551611 502 ntTSL 55.72□□□□□ -1.492e-7■□□□□ 11.1
SND1Q7KZF4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.752e-7■□□□□ 11.1
Retrieved 100 of 13,567 protein–RNA pairs in 71 ms