Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 VENTXP5-201ENST00000523979 775 ntBASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 AL136038.4-201ENST00000603606 1261 ntBASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 AC091076.1-201ENST00000610741 619 ntBASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDPD4Q6W3E5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 AL391807.1-203ENST00000604392 2365 ntBASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 PCED1CP-201ENST00000419887 785 ntBASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 AC005332.1-201ENST00000577698 1310 ntBASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDPD4Q6W3E5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GDPD4Q6W3E5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GDPD4Q6W3E5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
GDPD4Q6W3E5 AC093525.10-201ENST00000625130 1569 ntBASIC18.61■□□□□ 0.57
GDPD4Q6W3E5 AL163051.1-201ENST00000569214 1512 ntBASIC18.61■□□□□ 0.57
GDPD4Q6W3E5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GDPD4Q6W3E5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GDPD4Q6W3E5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GDPD4Q6W3E5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GDPD4Q6W3E5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GDPD4Q6W3E5 SPDYE13P-201ENST00000445314 798 ntBASIC18.61■□□□□ 0.57
GDPD4Q6W3E5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.61■□□□□ 0.57
GDPD4Q6W3E5 AP000550.4-202ENST00000639755 178 ntBASIC18.61■□□□□ 0.57
GDPD4Q6W3E5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GDPD4Q6W3E5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GDPD4Q6W3E5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
GDPD4Q6W3E5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GDPD4Q6W3E5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 IER3-202ENST00000376377 1350 ntBASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 HLA-F-220ENST00000434407 884 ntBASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 PVRIG2P-201ENST00000435460 978 ntBASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 ANO7L1-203ENST00000602586 1720 ntBASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
GDPD4Q6W3E5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 MYLKP1-201ENST00000509077 1580 ntBASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms