Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 AC026271.3-201ENST00000571884 352 ntBASIC18.98■□□□□ 0.63
CASC4Q6P4E1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 AC073195.1-201ENST00000607241 877 ntBASIC18.98■□□□□ 0.63
CASC4Q6P4E1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 AC068587.9-201ENST00000641814 219 ntBASIC18.98■□□□□ 0.63
CASC4Q6P4E1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 KRT8P3-201ENST00000519669 1449 ntBASIC18.98■□□□□ 0.63
CASC4Q6P4E1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 FAM207BP-201ENST00000447172 505 ntBASIC18.97■□□□□ 0.63
CASC4Q6P4E1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 RARRES2P10-201ENST00000564312 460 ntBASIC18.97■□□□□ 0.63
CASC4Q6P4E1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 AC073592.3-201ENST00000625118 1834 ntBASIC18.97■□□□□ 0.63
CASC4Q6P4E1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 KRT8P32-201ENST00000512863 1461 ntBASIC18.97■□□□□ 0.63
CASC4Q6P4E1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CASC4Q6P4E1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 KRT18P29-201ENST00000397031 1267 ntBASIC18.96■□□□□ 0.63
CASC4Q6P4E1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CASC4Q6P4E1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 AL359736.2-201ENST00000621992 437 ntBASIC18.95■□□□□ 0.62
CASC4Q6P4E1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms