Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMEM53Q6P2H8 BICD1-207ENST00000551848 1962 ntBASIC17.02■□□□□ 0.31
TMEM53Q6P2H8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TMEM53Q6P2H8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TMEM53Q6P2H8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMEM53Q6P2H8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
TMEM53Q6P2H8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
TMEM53Q6P2H8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TMEM53Q6P2H8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 AL359736.2-201ENST00000621992 437 ntBASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 TMEM191A-211ENST00000637163 1067 ntBASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 TREX1-205ENST00000625293 1783 ntBASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 LINC01465-201ENST00000408887 1940 ntBASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM53Q6P2H8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM53Q6P2H8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17■□□□□ 0.31
TMEM53Q6P2H8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEM53Q6P2H8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17■□□□□ 0.31
TMEM53Q6P2H8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM53Q6P2H8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM53Q6P2H8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM53Q6P2H8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM53Q6P2H8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM53Q6P2H8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TMEM53Q6P2H8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEM53Q6P2H8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM53Q6P2H8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17■□□□□ 0.31
TMEM53Q6P2H8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17■□□□□ 0.31
TMEM53Q6P2H8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17■□□□□ 0.31
TMEM53Q6P2H8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17■□□□□ 0.31
TMEM53Q6P2H8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17■□□□□ 0.31
TMEM53Q6P2H8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17■□□□□ 0.31
TMEM53Q6P2H8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM53Q6P2H8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TMEM53Q6P2H8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17■□□□□ 0.31
TMEM53Q6P2H8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEM53Q6P2H8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM53Q6P2H8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEM53Q6P2H8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17■□□□□ 0.31
TMEM53Q6P2H8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM53Q6P2H8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEM53Q6P2H8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM53Q6P2H8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17■□□□□ 0.31
TMEM53Q6P2H8 AC135776.1-201ENST00000319817 2481 ntBASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 AL158047.1-201ENST00000445918 881 ntBASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM53Q6P2H8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms