Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF43Q68DV7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF43Q68DV7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF43Q68DV7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF43Q68DV7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF43Q68DV7 RNF152P1-201ENST00000397754 604 ntBASIC19.48■□□□□ 0.71
RNF43Q68DV7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF43Q68DV7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF43Q68DV7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF43Q68DV7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 PCDHB18P-201ENST00000524813 2368 ntBASIC19.48■□□□□ 0.71
RNF43Q68DV7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF43Q68DV7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF43Q68DV7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF43Q68DV7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
RNF43Q68DV7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF43Q68DV7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF43Q68DV7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF43Q68DV7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF43Q68DV7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
RNF43Q68DV7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF43Q68DV7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF43Q68DV7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF43Q68DV7 AC092647.4-201ENST00000457211 535 ntBASIC19.47■□□□□ 0.71
RNF43Q68DV7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF43Q68DV7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF43Q68DV7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF43Q68DV7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF43Q68DV7 AC008622.2-201ENST00000617006 1229 ntBASIC19.47■□□□□ 0.71
RNF43Q68DV7 AC141257.4-201ENST00000634557 245 ntBASIC19.47■□□□□ 0.71
RNF43Q68DV7 AC136944.6-201ENST00000634818 245 ntBASIC19.47■□□□□ 0.71
RNF43Q68DV7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF43Q68DV7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF43Q68DV7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF43Q68DV7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF43Q68DV7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF43Q68DV7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF43Q68DV7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF43Q68DV7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF43Q68DV7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF43Q68DV7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RNF43Q68DV7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF43Q68DV7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF43Q68DV7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF43Q68DV7 LTB4R2-202ENST00000528054 3092 ntBASIC19.46■□□□□ 0.71
RNF43Q68DV7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RNF43Q68DV7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF43Q68DV7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF43Q68DV7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF43Q68DV7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF43Q68DV7 KRT8P3-201ENST00000519669 1449 ntBASIC19.46■□□□□ 0.71
RNF43Q68DV7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF43Q68DV7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF43Q68DV7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF43Q68DV7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF43Q68DV7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.46■□□□□ 0.71
RNF43Q68DV7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF43Q68DV7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF43Q68DV7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF43Q68DV7 AC139887.4-201ENST00000607877 719 ntBASIC19.46■□□□□ 0.71
RNF43Q68DV7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF43Q68DV7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF43Q68DV7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF43Q68DV7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF43Q68DV7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF43Q68DV7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF43Q68DV7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF43Q68DV7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF43Q68DV7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF43Q68DV7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF43Q68DV7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF43Q68DV7 KRT8P45-201ENST00000414328 1447 ntBASIC19.45■□□□□ 0.7
RNF43Q68DV7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF43Q68DV7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF43Q68DV7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF43Q68DV7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF43Q68DV7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RNF43Q68DV7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF43Q68DV7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF43Q68DV7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.45■□□□□ 0.7
RNF43Q68DV7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms