Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 KRT18P23-201ENST00000435622 1283 ntBASIC16.26■□□□□ 0.19
FAM27BQ5VT28 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 AC145285.6-201ENST00000604632 637 ntBASIC16.26■□□□□ 0.19
FAM27BQ5VT28 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM27BQ5VT28 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 AL162741.1-201ENST00000565563 1558 ntBASIC16.25■□□□□ 0.19
FAM27BQ5VT28 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM27BQ5VT28 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 AC020763.4-201ENST00000623414 4170 ntBASIC16.24■□□□□ 0.19
FAM27BQ5VT28 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 AC073912.3-201ENST00000624414 853 ntBASIC16.24■□□□□ 0.19
FAM27BQ5VT28 AC112497.1-201ENST00000624824 639 ntBASIC16.24■□□□□ 0.19
FAM27BQ5VT28 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FAM27BQ5VT28 BICD1-207ENST00000551848 1962 ntBASIC16.24■□□□□ 0.19
FAM27BQ5VT28 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms