Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATPAF1Q5TC12 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATPAF1Q5TC12 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATPAF1Q5TC12 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.15■□□□□ 0.18
ATPAF1Q5TC12 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATPAF1Q5TC12 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATPAF1Q5TC12 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATPAF1Q5TC12 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.14■□□□□ 0.18
ATPAF1Q5TC12 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.14■□□□□ 0.18
ATPAF1Q5TC12 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.14■□□□□ 0.18
ATPAF1Q5TC12 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 AC131212.4-201ENST00000623606 975 ntBASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ATPAF1Q5TC12 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 RPS2P4-201ENST00000476944 856 ntBASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 Z99916.2-201ENST00000604037 246 ntBASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATPAF1Q5TC12 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 KRT16P1-201ENST00000399124 1418 ntBASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 AC026271.3-201ENST00000571884 352 ntBASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 AL049637.2-201ENST00000641778 930 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms