Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC139713.2-201ENST00000641328 2723 ntBASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00242Q5T6M2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 SLC29A4P1-201ENST00000398760 971 ntBASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 PRKY-204ENST00000533551 1019 ntBASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 MIR5787-201ENST00000611784 55 ntBASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 AC092437.1-201ENST00000624794 1048 ntBASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 FST-202ENST00000396947 2538 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 POR-209ENST00000439269 1858 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00242Q5T6M2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 REXO1L9P-201ENST00000604264 2108 ntBASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 PRORSD1P-202ENST00000563365 2154 ntBASIC12.71□□□□□ -0.37
LINC00242Q5T6M2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00242Q5T6M2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.71□□□□□ -0.38
LINC00242Q5T6M2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00242Q5T6M2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
LINC00242Q5T6M2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
LINC00242Q5T6M2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC00242Q5T6M2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00242Q5T6M2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00242Q5T6M2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00242Q5T6M2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00242Q5T6M2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00242Q5T6M2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00242Q5T6M2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC00242Q5T6M2 AC008556.1-201ENST00000610908 2040 ntBASIC12.71□□□□□ -0.38
LINC00242Q5T6M2 KRT8P3-201ENST00000519669 1449 ntBASIC12.71□□□□□ -0.38
LINC00242Q5T6M2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms