Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 AC009947.2-201ENST00000444014 672 ntBASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 AC092865.7-201ENST00000641832 219 ntBASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 AL357033.4-201ENST00000617703 1807 ntBASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LDLRAP1Q5SW96 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 AC093525.10-201ENST00000625130 1569 ntBASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 AC034236.2-201ENST00000606662 1610 ntBASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 KRT8P7-201ENST00000533003 1432 ntBASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 LTB4R2-202ENST00000528054 3092 ntBASIC18.48■□□□□ 0.55
LDLRAP1Q5SW96 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 BX664615.1-201ENST00000443558 458 ntBASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 KRT18P57-201ENST00000443599 1254 ntBASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 Z98044.1-201ENST00000632503 1764 ntBASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
LDLRAP1Q5SW96 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 RCN1P1-201ENST00000400413 996 ntBASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 AL031432.5-201ENST00000641059 760 ntBASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LDLRAP1Q5SW96 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms