Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 KRT18P23-201ENST00000435622 1283 ntBASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 AC099343.3-201ENST00000605834 2503 ntBASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTSL3PQ5NE16 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 AL354751.1-201ENST00000412768 1863 ntBASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSL3PQ5NE16 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 HMGA1P5-201ENST00000412453 271 ntBASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 AC145285.6-201ENST00000604632 637 ntBASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTSL3PQ5NE16 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTSL3PQ5NE16 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTSL3PQ5NE16 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTSL3PQ5NE16 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTSL3PQ5NE16 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.27■□□□□ 0.52
CTSL3PQ5NE16 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.27■□□□□ 0.52
CTSL3PQ5NE16 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.27■□□□□ 0.52
CTSL3PQ5NE16 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.27■□□□□ 0.52
CTSL3PQ5NE16 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTSL3PQ5NE16 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTSL3PQ5NE16 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTSL3PQ5NE16 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.27■□□□□ 0.52
CTSL3PQ5NE16 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.27■□□□□ 0.52
CTSL3PQ5NE16 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTSL3PQ5NE16 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTSL3PQ5NE16 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.52
CTSL3PQ5NE16 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
CTSL3PQ5NE16 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms