Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 PCED1CP-201ENST00000419887 785 ntBASIC16.31■□□□□ 0.2
FREM1Q5H8C1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.31■□□□□ 0.2
FREM1Q5H8C1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 MIR3180-1-201ENST00000580374 94 ntBASIC16.3■□□□□ 0.2
FREM1Q5H8C1 MIR3180-3-201ENST00000584616 94 ntBASIC16.3■□□□□ 0.2
FREM1Q5H8C1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
FREM1Q5H8C1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FREM1Q5H8C1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.28■□□□□ 0.2
FREM1Q5H8C1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 RNF126P1-202ENST00000569893 925 ntBASIC16.28■□□□□ 0.2
FREM1Q5H8C1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
FREM1Q5H8C1 AL136038.4-201ENST00000603606 1261 ntBASIC16.28■□□□□ 0.2
FREM1Q5H8C1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms