Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 AC012306.2-201ENST00000609350 630 ntBASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KHDC1Q4VXA5 AC106820.2-201ENST00000563775 3264 ntBASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 NAPSB-206ENST00000562112 1266 ntBASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 AL031598.1-201ENST00000561511 1773 ntBASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KHDC1Q4VXA5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 ECEL1P3-201ENST00000427961 737 ntBASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KHDC1Q4VXA5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms