Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
USH1GQ495M9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USH1GQ495M9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.31■■□□□ 1
USH1GQ495M9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USH1GQ495M9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.31■■□□□ 1
USH1GQ495M9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.31■■□□□ 1
USH1GQ495M9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.31■■□□□ 1
USH1GQ495M9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.31■■□□□ 1
USH1GQ495M9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.31■■□□□ 1
USH1GQ495M9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
USH1GQ495M9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USH1GQ495M9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.31■■□□□ 1
USH1GQ495M9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.31■■□□□ 1
USH1GQ495M9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USH1GQ495M9 AL162741.1-201ENST00000565563 1558 ntBASIC21.31■■□□□ 1
USH1GQ495M9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USH1GQ495M9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.3■■□□□ 1
USH1GQ495M9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.3■■□□□ 1
USH1GQ495M9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USH1GQ495M9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USH1GQ495M9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USH1GQ495M9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
USH1GQ495M9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
USH1GQ495M9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
USH1GQ495M9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.3■■□□□ 1
USH1GQ495M9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.3■■□□□ 1
USH1GQ495M9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.3■■□□□ 1
USH1GQ495M9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USH1GQ495M9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
USH1GQ495M9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.3■■□□□ 1
USH1GQ495M9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USH1GQ495M9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USH1GQ495M9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.3■■□□□ 1
USH1GQ495M9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.29■■□□□ 1
USH1GQ495M9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.29■■□□□ 1
USH1GQ495M9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USH1GQ495M9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USH1GQ495M9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
USH1GQ495M9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
USH1GQ495M9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.29■■□□□ 1
USH1GQ495M9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
USH1GQ495M9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.29■■□□□ 1
USH1GQ495M9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USH1GQ495M9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.29■■□□□ 1
USH1GQ495M9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.29■■□□□ 1
USH1GQ495M9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USH1GQ495M9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.29■■□□□ 1
USH1GQ495M9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
USH1GQ495M9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
USH1GQ495M9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
USH1GQ495M9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.29■■□□□ 1
USH1GQ495M9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
USH1GQ495M9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
USH1GQ495M9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
USH1GQ495M9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
USH1GQ495M9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.28■■□□□ 1
USH1GQ495M9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.28■■□□□ 1
USH1GQ495M9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
USH1GQ495M9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USH1GQ495M9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.28■■□□□ 1
USH1GQ495M9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
USH1GQ495M9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.28■■□□□ 1
USH1GQ495M9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USH1GQ495M9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.28■■□□□ 1
USH1GQ495M9 AC011498.5-201ENST00000592027 486 ntBASIC21.28■■□□□ 1
USH1GQ495M9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
USH1GQ495M9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.28■■□□□ 1
USH1GQ495M9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
USH1GQ495M9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USH1GQ495M9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
USH1GQ495M9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USH1GQ495M9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.27■■□□□ 1
USH1GQ495M9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USH1GQ495M9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
USH1GQ495M9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
USH1GQ495M9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USH1GQ495M9 HCG4P8-203ENST00000443049 980 ntBASIC21.27■■□□□ 1
USH1GQ495M9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.27■■□□□ 1
USH1GQ495M9 KRT18P56-201ENST00000507275 550 ntBASIC21.27■■□□□ 1
USH1GQ495M9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.27■■□□□ 1
USH1GQ495M9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.27■■□□□ 1
USH1GQ495M9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.27■■□□□ 1
USH1GQ495M9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USH1GQ495M9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.27■■□□□ 1
USH1GQ495M9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USH1GQ495M9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USH1GQ495M9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
USH1GQ495M9 AL499627.1-201ENST00000569373 2188 ntBASIC21.27■■□□□ 1
USH1GQ495M9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
USH1GQ495M9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
USH1GQ495M9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
USH1GQ495M9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
USH1GQ495M9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
USH1GQ495M9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USH1GQ495M9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USH1GQ495M9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
USH1GQ495M9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.26■□□□□ 0.99
USH1GQ495M9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
USH1GQ495M9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USH1GQ495M9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms