Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 AL163051.1-201ENST00000569214 1512 ntBASIC16.09■□□□□ 0.17
RSPO1Q2MKA7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.08■□□□□ 0.17
RSPO1Q2MKA7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.08■□□□□ 0.17
RSPO1Q2MKA7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RSPO1Q2MKA7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RSPO1Q2MKA7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RSPO1Q2MKA7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
RSPO1Q2MKA7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RSPO1Q2MKA7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RSPO1Q2MKA7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 ECEL1P2-202ENST00000465689 757 ntBASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 NOC2LP1-202ENST00000452600 2235 ntBASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.08■□□□□ 0.16
RSPO1Q2MKA7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 SDHAP2-201ENST00000455183 2001 ntBASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 KRT8P7-201ENST00000533003 1432 ntBASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RSPO1Q2MKA7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 KRT18P23-201ENST00000435622 1283 ntBASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms