Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH1Q08174 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH1Q08174 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PCDH1Q08174 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH1Q08174 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH1Q08174 NEFHP1-201ENST00000412845 2629 ntBASIC17.93■□□□□ 0.46
PCDH1Q08174 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDH1Q08174 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH1Q08174 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PCDH1Q08174 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH1Q08174 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH1Q08174 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDH1Q08174 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH1Q08174 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PCDH1Q08174 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH1Q08174 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCDH1Q08174 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
PCDH1Q08174 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH1Q08174 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH1Q08174 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH1Q08174 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH1Q08174 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH1Q08174 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDH1Q08174 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH1Q08174 AC007663.1-201ENST00000438948 1240 ntBASIC17.92■□□□□ 0.46
PCDH1Q08174 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH1Q08174 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH1Q08174 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDH1Q08174 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH1Q08174 EGLN1P1-201ENST00000531623 762 ntBASIC17.92■□□□□ 0.46
PCDH1Q08174 BX088651.1-201ENST00000540551 451 ntBASIC17.92■□□□□ 0.46
PCDH1Q08174 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.92■□□□□ 0.46
PCDH1Q08174 C2orf69P3-201ENST00000565542 1120 ntBASIC17.92■□□□□ 0.46
PCDH1Q08174 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDH1Q08174 AC116562.4-202ENST00000641738 218 ntBASIC17.92■□□□□ 0.46
PCDH1Q08174 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH1Q08174 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH1Q08174 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH1Q08174 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH1Q08174 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH1Q08174 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH1Q08174 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH1Q08174 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PCDH1Q08174 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PCDH1Q08174 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH1Q08174 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH1Q08174 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH1Q08174 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH1Q08174 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH1Q08174 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH1Q08174 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PCDH1Q08174 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH1Q08174 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH1Q08174 AC104581.1-202ENST00000635932 2618 ntBASIC17.91■□□□□ 0.46
PCDH1Q08174 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH1Q08174 KRT8P50-201ENST00000562022 1438 ntBASIC17.91■□□□□ 0.46
PCDH1Q08174 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH1Q08174 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDH1Q08174 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDH1Q08174 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDH1Q08174 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH1Q08174 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH1Q08174 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PCDH1Q08174 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDH1Q08174 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH1Q08174 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH1Q08174 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH1Q08174 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH1Q08174 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH1Q08174 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH1Q08174 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH1Q08174 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH1Q08174 AC036111.1-201ENST00000533973 1582 ntBASIC17.91■□□□□ 0.46
PCDH1Q08174 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH1Q08174 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH1Q08174 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PCDH1Q08174 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH1Q08174 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH1Q08174 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH1Q08174 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH1Q08174 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH1Q08174 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.9■□□□□ 0.46
PCDH1Q08174 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDH1Q08174 MIR1238-201ENST00000408483 83 ntBASIC17.9■□□□□ 0.46
PCDH1Q08174 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH1Q08174 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PCDH1Q08174 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDH1Q08174 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PCDH1Q08174 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH1Q08174 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH1Q08174 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH1Q08174 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH1Q08174 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH1Q08174 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PCDH1Q08174 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDH1Q08174 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDH1Q08174 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
PCDH1Q08174 AL354751.1-201ENST00000412768 1863 ntBASIC17.89■□□□□ 0.45
PCDH1Q08174 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDH1Q08174 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms