Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.84■□□□□ 0.77
GCNT1Q02742 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.84■□□□□ 0.77
GCNT1Q02742 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.84■□□□□ 0.77
GCNT1Q02742 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GCNT1Q02742 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GCNT1Q02742 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.84■□□□□ 0.77
GCNT1Q02742 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
GCNT1Q02742 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.84■□□□□ 0.77
GCNT1Q02742 NEK4P2-201ENST00000580004 1012 ntBASIC19.84■□□□□ 0.77
GCNT1Q02742 AC073912.3-201ENST00000624414 853 ntBASIC19.84■□□□□ 0.77
GCNT1Q02742 AL163051.1-201ENST00000569214 1512 ntBASIC19.84■□□□□ 0.77
GCNT1Q02742 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.84■□□□□ 0.77
GCNT1Q02742 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GCNT1Q02742 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GCNT1Q02742 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.84■□□□□ 0.77
GCNT1Q02742 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.84■□□□□ 0.77
GCNT1Q02742 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GCNT1Q02742 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GCNT1Q02742 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.84■□□□□ 0.77
GCNT1Q02742 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GCNT1Q02742 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GCNT1Q02742 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
GCNT1Q02742 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
GCNT1Q02742 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
GCNT1Q02742 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
GCNT1Q02742 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GCNT1Q02742 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GCNT1Q02742 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GCNT1Q02742 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.83■□□□□ 0.77
GCNT1Q02742 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GCNT1Q02742 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GCNT1Q02742 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GCNT1Q02742 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.77
GCNT1Q02742 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GCNT1Q02742 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GCNT1Q02742 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.83■□□□□ 0.77
GCNT1Q02742 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.83■□□□□ 0.77
GCNT1Q02742 AC104390.1-201ENST00000555663 520 ntBASIC19.83■□□□□ 0.77
GCNT1Q02742 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.83■□□□□ 0.77
GCNT1Q02742 MIR3180-4-201ENST00000582223 153 ntBASIC19.83■□□□□ 0.77
GCNT1Q02742 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GCNT1Q02742 AC012306.2-201ENST00000609350 630 ntBASIC19.83■□□□□ 0.77
GCNT1Q02742 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
GCNT1Q02742 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.83■□□□□ 0.76
GCNT1Q02742 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GCNT1Q02742 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.76
GCNT1Q02742 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
GCNT1Q02742 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
GCNT1Q02742 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GCNT1Q02742 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
GCNT1Q02742 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.82■□□□□ 0.76
GCNT1Q02742 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.82■□□□□ 0.76
GCNT1Q02742 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
GCNT1Q02742 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
GCNT1Q02742 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
GCNT1Q02742 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.82■□□□□ 0.76
GCNT1Q02742 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.82■□□□□ 0.76
GCNT1Q02742 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 ECEL1P3-201ENST00000427961 737 ntBASIC19.82■□□□□ 0.76
GCNT1Q02742 AC009947.2-201ENST00000444014 672 ntBASIC19.82■□□□□ 0.76
GCNT1Q02742 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.82■□□□□ 0.76
GCNT1Q02742 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.82■□□□□ 0.76
GCNT1Q02742 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.82■□□□□ 0.76
GCNT1Q02742 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
GCNT1Q02742 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
GCNT1Q02742 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.82■□□□□ 0.76
GCNT1Q02742 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.82■□□□□ 0.76
GCNT1Q02742 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GCNT1Q02742 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCNT1Q02742 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GCNT1Q02742 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCNT1Q02742 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.81■□□□□ 0.76
GCNT1Q02742 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCNT1Q02742 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCNT1Q02742 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.81■□□□□ 0.76
GCNT1Q02742 MIR149-201ENST00000384879 89 ntBASIC19.81■□□□□ 0.76
GCNT1Q02742 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.81■□□□□ 0.76
GCNT1Q02742 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.81■□□□□ 0.76
GCNT1Q02742 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GCNT1Q02742 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.81■□□□□ 0.76
GCNT1Q02742 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
GCNT1Q02742 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms