Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CDR2Q01850 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDR2Q01850 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDR2Q01850 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.81■□□□□ 0.76
CDR2Q01850 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CDR2Q01850 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDR2Q01850 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDR2Q01850 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.81■□□□□ 0.76
CDR2Q01850 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.81■□□□□ 0.76
CDR2Q01850 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CDR2Q01850 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.81■□□□□ 0.76
CDR2Q01850 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.81■□□□□ 0.76
CDR2Q01850 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.81■□□□□ 0.76
CDR2Q01850 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDR2Q01850 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDR2Q01850 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.81■□□□□ 0.76
CDR2Q01850 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDR2Q01850 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.81■□□□□ 0.76
CDR2Q01850 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDR2Q01850 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDR2Q01850 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDR2Q01850 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.81■□□□□ 0.76
CDR2Q01850 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDR2Q01850 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDR2Q01850 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDR2Q01850 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDR2Q01850 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CDR2Q01850 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDR2Q01850 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDR2Q01850 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDR2Q01850 KRT17P2-201ENST00000300992 1314 ntBASIC19.8■□□□□ 0.76
CDR2Q01850 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDR2Q01850 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.8■□□□□ 0.76
CDR2Q01850 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CDR2Q01850 AL162741.1-201ENST00000565563 1558 ntBASIC19.8■□□□□ 0.76
CDR2Q01850 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDR2Q01850 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDR2Q01850 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDR2Q01850 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CDR2Q01850 AL390955.1-201ENST00000428694 934 ntBASIC19.8■□□□□ 0.76
CDR2Q01850 AL355075.4-201ENST00000554988 638 ntBASIC19.8■□□□□ 0.76
CDR2Q01850 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.8■□□□□ 0.76
CDR2Q01850 AL353719.1-201ENST00000566847 864 ntBASIC19.8■□□□□ 0.76
CDR2Q01850 MIR3180-5-201ENST00000583743 153 ntBASIC19.8■□□□□ 0.76
CDR2Q01850 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.8■□□□□ 0.76
CDR2Q01850 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDR2Q01850 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDR2Q01850 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDR2Q01850 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDR2Q01850 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDR2Q01850 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDR2Q01850 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDR2Q01850 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDR2Q01850 AC034236.2-201ENST00000606662 1610 ntBASIC19.8■□□□□ 0.76
CDR2Q01850 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.8■□□□□ 0.76
CDR2Q01850 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDR2Q01850 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.79■□□□□ 0.76
CDR2Q01850 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDR2Q01850 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDR2Q01850 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDR2Q01850 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CDR2Q01850 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDR2Q01850 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDR2Q01850 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR2Q01850 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.79■□□□□ 0.76
CDR2Q01850 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR2Q01850 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR2Q01850 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR2Q01850 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.79■□□□□ 0.76
CDR2Q01850 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.79■□□□□ 0.76
CDR2Q01850 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.79■□□□□ 0.76
CDR2Q01850 TSPY17P-201ENST00000450329 467 ntBASIC19.79■□□□□ 0.76
CDR2Q01850 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.79■□□□□ 0.76
CDR2Q01850 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDR2Q01850 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDR2Q01850 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.79■□□□□ 0.76
CDR2Q01850 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.79■□□□□ 0.76
CDR2Q01850 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR2Q01850 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.79■□□□□ 0.76
CDR2Q01850 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CDR2Q01850 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.79■□□□□ 0.76
CDR2Q01850 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR2Q01850 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.79■□□□□ 0.76
CDR2Q01850 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDR2Q01850 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR2Q01850 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDR2Q01850 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CDR2Q01850 AC007613.1-201ENST00000572811 2597 ntBASIC19.79■□□□□ 0.76
CDR2Q01850 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR2Q01850 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDR2Q01850 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDR2Q01850 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.78■□□□□ 0.76
CDR2Q01850 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDR2Q01850 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDR2Q01850 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.78■□□□□ 0.76
CDR2Q01850 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.78■□□□□ 0.76
CDR2Q01850 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDR2Q01850 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.78■□□□□ 0.76
CDR2Q01850 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms