Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.84■□□□□ 0.93
TPM4P67936 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.84■□□□□ 0.93
TPM4P67936 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TPM4P67936 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.84■□□□□ 0.93
TPM4P67936 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TPM4P67936 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TPM4P67936 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.84■□□□□ 0.93
TPM4P67936 HLA-A-209ENST00000638375 975 ntBASIC20.84■□□□□ 0.93
TPM4P67936 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TPM4P67936 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TPM4P67936 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TPM4P67936 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
TPM4P67936 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
TPM4P67936 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
TPM4P67936 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TPM4P67936 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.84■□□□□ 0.93
TPM4P67936 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TPM4P67936 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
TPM4P67936 MTMR9LP-203ENST00000426597 1545 ntBASIC20.83■□□□□ 0.93
TPM4P67936 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.83■□□□□ 0.93
TPM4P67936 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TPM4P67936 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM4P67936 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.83■□□□□ 0.93
TPM4P67936 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM4P67936 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM4P67936 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TPM4P67936 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM4P67936 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.83■□□□□ 0.93
TPM4P67936 AC006970.2-201ENST00000450065 779 ntBASIC20.83■□□□□ 0.93
TPM4P67936 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM4P67936 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TPM4P67936 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.83■□□□□ 0.93
TPM4P67936 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.83■□□□□ 0.93
TPM4P67936 AC068587.9-201ENST00000641814 219 ntBASIC20.83■□□□□ 0.93
TPM4P67936 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM4P67936 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.83■□□□□ 0.92
TPM4P67936 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TPM4P67936 GNAS-203ENST00000306120 1878 ntBASIC20.83■□□□□ 0.92
TPM4P67936 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TPM4P67936 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
TPM4P67936 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TPM4P67936 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.83■□□□□ 0.92
TPM4P67936 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TPM4P67936 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM4P67936 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.82■□□□□ 0.92
TPM4P67936 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM4P67936 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
TPM4P67936 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM4P67936 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TPM4P67936 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TPM4P67936 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM4P67936 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM4P67936 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TPM4P67936 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM4P67936 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.82■□□□□ 0.92
TPM4P67936 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM4P67936 C1QL1P1-201ENST00000568105 661 ntBASIC20.82■□□□□ 0.92
TPM4P67936 AC004264.1-201ENST00000608354 794 ntBASIC20.82■□□□□ 0.92
TPM4P67936 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.82■□□□□ 0.92
TPM4P67936 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM4P67936 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM4P67936 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM4P67936 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM4P67936 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM4P67936 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM4P67936 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM4P67936 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM4P67936 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
TPM4P67936 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
TPM4P67936 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM4P67936 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM4P67936 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.81■□□□□ 0.92
TPM4P67936 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM4P67936 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TPM4P67936 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.81■□□□□ 0.92
TPM4P67936 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM4P67936 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM4P67936 AL499627.1-201ENST00000569373 2188 ntBASIC20.81■□□□□ 0.92
TPM4P67936 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM4P67936 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM4P67936 CROCCP5-201ENST00000436658 830 ntBASIC20.81■□□□□ 0.92
TPM4P67936 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM4P67936 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TPM4P67936 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM4P67936 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM4P67936 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
TPM4P67936 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM4P67936 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM4P67936 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM4P67936 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM4P67936 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM4P67936 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM4P67936 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM4P67936 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.8■□□□□ 0.92
TPM4P67936 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.8■□□□□ 0.92
TPM4P67936 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TPM4P67936 ESPNP-201ENST00000270691 2015 ntBASIC20.8■□□□□ 0.92
TPM4P67936 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM4P67936 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.8■□□□□ 0.92
TPM4P67936 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms