Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC126763.1-201ENST00000552015 2118 ntBASIC15.14■□□□□ 0.01
SPCS3P61009 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
SPCS3P61009 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.14■□□□□ 0.01
SPCS3P61009 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPCS3P61009 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
SPCS3P61009 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPCS3P61009 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPCS3P61009 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
SPCS3P61009 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.14■□□□□ 0.01
SPCS3P61009 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPCS3P61009 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.14■□□□□ 0.01
SPCS3P61009 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
SPCS3P61009 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SPCS3P61009 HEIH-201ENST00000623091 1652 ntBASIC15.14■□□□□ 0.01
SPCS3P61009 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SPCS3P61009 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SPCS3P61009 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.14■□□□□ 0.01
SPCS3P61009 NCF1B-203ENST00000435988 1254 ntBASIC15.14■□□□□ 0.01
SPCS3P61009 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SPCS3P61009 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.14■□□□□ 0.01
SPCS3P61009 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.14■□□□□ 0.01
SPCS3P61009 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.14■□□□□ 0.01
SPCS3P61009 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.14■□□□□ 0.01
SPCS3P61009 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.14■□□□□ 0.01
SPCS3P61009 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.14■□□□□ 0.01
SPCS3P61009 HLA-A-209ENST00000638375 975 ntBASIC15.14■□□□□ 0.01
SPCS3P61009 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPCS3P61009 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.14■□□□□ 0.01
SPCS3P61009 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPCS3P61009 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SPCS3P61009 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPCS3P61009 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SPCS3P61009 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPCS3P61009 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPCS3P61009 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.14■□□□□ 0.01
SPCS3P61009 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPCS3P61009 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.14■□□□□ 0.01
SPCS3P61009 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPCS3P61009 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SPCS3P61009 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.13■□□□□ 0.01
SPCS3P61009 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.13■□□□□ 0.01
SPCS3P61009 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.13■□□□□ 0.01
SPCS3P61009 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.13■□□□□ 0.01
SPCS3P61009 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.13■□□□□ 0.01
SPCS3P61009 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.13■□□□□ 0.01
SPCS3P61009 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.13■□□□□ 0.01
SPCS3P61009 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SPCS3P61009 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
SPCS3P61009 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
SPCS3P61009 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.13■□□□□ 0.01
SPCS3P61009 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.13■□□□□ 0.01
SPCS3P61009 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.13■□□□□ 0.01
SPCS3P61009 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.13■□□□□ 0.01
SPCS3P61009 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.13■□□□□ 0.01
SPCS3P61009 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.13■□□□□ 0.01
SPCS3P61009 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.13■□□□□ 0.01
SPCS3P61009 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SPCS3P61009 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.13■□□□□ 0.01
SPCS3P61009 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
SPCS3P61009 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SPCS3P61009 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPCS3P61009 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPCS3P61009 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPCS3P61009 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPCS3P61009 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
SPCS3P61009 AL596257.1-201ENST00000641463 2694 ntBASIC15.12■□□□□ 0.01
SPCS3P61009 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPCS3P61009 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SPCS3P61009 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.12■□□□□ 0.01
SPCS3P61009 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPCS3P61009 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.12■□□□□ 0.01
SPCS3P61009 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.12■□□□□ 0.01
SPCS3P61009 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPCS3P61009 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.12■□□□□ 0.01
SPCS3P61009 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SPCS3P61009 C1QL1P1-201ENST00000568105 661 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms