Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VSX2P58304 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VSX2P58304 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VSX2P58304 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VSX2P58304 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
VSX2P58304 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
VSX2P58304 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VSX2P58304 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VSX2P58304 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.78■□□□□ 0.44
VSX2P58304 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.78■□□□□ 0.44
VSX2P58304 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.78■□□□□ 0.44
VSX2P58304 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VSX2P58304 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VSX2P58304 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.78■□□□□ 0.44
VSX2P58304 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.78■□□□□ 0.44
VSX2P58304 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.78■□□□□ 0.44
VSX2P58304 HOMER2P1-201ENST00000455653 964 ntBASIC17.78■□□□□ 0.44
VSX2P58304 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VSX2P58304 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VSX2P58304 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.78■□□□□ 0.44
VSX2P58304 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
VSX2P58304 AC034236.2-201ENST00000606662 1610 ntBASIC17.78■□□□□ 0.44
VSX2P58304 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.78■□□□□ 0.44
VSX2P58304 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
VSX2P58304 AC098818.2-201ENST00000564925 2320 ntBASIC17.78■□□□□ 0.44
VSX2P58304 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.78■□□□□ 0.44
VSX2P58304 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.78■□□□□ 0.44
VSX2P58304 Z98044.1-201ENST00000632503 1764 ntBASIC17.78■□□□□ 0.44
VSX2P58304 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
VSX2P58304 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
VSX2P58304 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VSX2P58304 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VSX2P58304 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.78■□□□□ 0.44
VSX2P58304 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VSX2P58304 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VSX2P58304 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.77■□□□□ 0.44
VSX2P58304 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VSX2P58304 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.44
VSX2P58304 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.77■□□□□ 0.44
VSX2P58304 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VSX2P58304 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VSX2P58304 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
VSX2P58304 FAM8A6P-201ENST00000407496 1135 ntBASIC17.77■□□□□ 0.44
VSX2P58304 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.77■□□□□ 0.44
VSX2P58304 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.77■□□□□ 0.44
VSX2P58304 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.77■□□□□ 0.44
VSX2P58304 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VSX2P58304 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.77■□□□□ 0.44
VSX2P58304 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.77■□□□□ 0.44
VSX2P58304 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VSX2P58304 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.77■□□□□ 0.44
VSX2P58304 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
VSX2P58304 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
VSX2P58304 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VSX2P58304 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
VSX2P58304 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VSX2P58304 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VSX2P58304 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
VSX2P58304 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
VSX2P58304 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VSX2P58304 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
VSX2P58304 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.77■□□□□ 0.43
VSX2P58304 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.77■□□□□ 0.43
VSX2P58304 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VSX2P58304 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.77■□□□□ 0.43
VSX2P58304 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
VSX2P58304 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VSX2P58304 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VSX2P58304 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
VSX2P58304 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VSX2P58304 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.76■□□□□ 0.43
VSX2P58304 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.76■□□□□ 0.43
VSX2P58304 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.76■□□□□ 0.43
VSX2P58304 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VSX2P58304 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VSX2P58304 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VSX2P58304 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.76■□□□□ 0.43
VSX2P58304 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.76■□□□□ 0.43
VSX2P58304 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
VSX2P58304 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.76■□□□□ 0.43
VSX2P58304 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.76■□□□□ 0.43
VSX2P58304 AC087388.1-201ENST00000571370 1112 ntBASIC17.76■□□□□ 0.43
VSX2P58304 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.76■□□□□ 0.43
VSX2P58304 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.76■□□□□ 0.43
VSX2P58304 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.76■□□□□ 0.43
VSX2P58304 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.76■□□□□ 0.43
VSX2P58304 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.76■□□□□ 0.43
VSX2P58304 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VSX2P58304 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VSX2P58304 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VSX2P58304 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VSX2P58304 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VSX2P58304 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.75■□□□□ 0.43
VSX2P58304 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
VSX2P58304 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms