Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.17■□□□□ 0.18
CLDN12P56749 PNMA6B-201ENST00000538162 1200 ntBASIC16.17■□□□□ 0.18
CLDN12P56749 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.17■□□□□ 0.18
CLDN12P56749 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN12P56749 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN12P56749 AC092118.2-201ENST00000613495 667 ntBASIC16.17■□□□□ 0.18
CLDN12P56749 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.17■□□□□ 0.18
CLDN12P56749 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN12P56749 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN12P56749 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN12P56749 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CLDN12P56749 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN12P56749 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN12P56749 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN12P56749 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN12P56749 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN12P56749 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN12P56749 REXO1L9P-201ENST00000604264 2108 ntBASIC16.16■□□□□ 0.18
CLDN12P56749 AC093677.2-201ENST00000600169 1863 ntBASIC16.16■□□□□ 0.18
CLDN12P56749 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN12P56749 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CLDN12P56749 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.16■□□□□ 0.18
CLDN12P56749 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN12P56749 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CLDN12P56749 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN12P56749 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN12P56749 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CLDN12P56749 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN12P56749 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN12P56749 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN12P56749 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN12P56749 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN12P56749 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.16■□□□□ 0.18
CLDN12P56749 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.16■□□□□ 0.18
CLDN12P56749 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.16■□□□□ 0.18
CLDN12P56749 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN12P56749 HLA-A-209ENST00000638375 975 ntBASIC16.16■□□□□ 0.18
CLDN12P56749 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN12P56749 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN12P56749 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN12P56749 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN12P56749 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN12P56749 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN12P56749 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN12P56749 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN12P56749 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN12P56749 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CLDN12P56749 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN12P56749 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN12P56749 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN12P56749 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CLDN12P56749 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN12P56749 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CLDN12P56749 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN12P56749 AC138028.4-201ENST00000564984 1845 ntBASIC16.15■□□□□ 0.18
CLDN12P56749 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
CLDN12P56749 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN12P56749 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN12P56749 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.15■□□□□ 0.18
CLDN12P56749 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN12P56749 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN12P56749 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN12P56749 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CLDN12P56749 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.15■□□□□ 0.18
CLDN12P56749 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLDN12P56749 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN12P56749 RARRES2P6-201ENST00000567333 442 ntBASIC16.15■□□□□ 0.18
CLDN12P56749 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CLDN12P56749 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 HLA-B-256ENST00000639848 1089 ntBASIC16.15■□□□□ 0.18
CLDN12P56749 AC068587.9-201ENST00000641814 219 ntBASIC16.15■□□□□ 0.18
CLDN12P56749 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLDN12P56749 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN12P56749 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLDN12P56749 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN12P56749 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN12P56749 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.14■□□□□ 0.18
CLDN12P56749 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.14■□□□□ 0.18
CLDN12P56749 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN12P56749 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN12P56749 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
CLDN12P56749 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN12P56749 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms