Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
PAX9P55771 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.92□□□□□ -0.02
PAX9P55771 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.92□□□□□ -0.02
PAX9P55771 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 KRT8P3-201ENST00000519669 1449 ntBASIC14.92□□□□□ -0.02
PAX9P55771 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.91□□□□□ -0.02
PAX9P55771 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.91□□□□□ -0.02
PAX9P55771 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PAX9P55771 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.91□□□□□ -0.02
PAX9P55771 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
PAX9P55771 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.91□□□□□ -0.02
PAX9P55771 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PAX9P55771 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.91□□□□□ -0.02
PAX9P55771 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.91□□□□□ -0.02
PAX9P55771 CROCCP5-201ENST00000436658 830 ntBASIC14.91□□□□□ -0.02
PAX9P55771 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.91□□□□□ -0.02
PAX9P55771 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.91□□□□□ -0.02
PAX9P55771 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
PAX9P55771 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.91□□□□□ -0.02
PAX9P55771 PNMA6B-201ENST00000538162 1200 ntBASIC14.91□□□□□ -0.02
PAX9P55771 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.91□□□□□ -0.02
PAX9P55771 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.91□□□□□ -0.02
PAX9P55771 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.91□□□□□ -0.02
PAX9P55771 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.91□□□□□ -0.02
PAX9P55771 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.91□□□□□ -0.02
PAX9P55771 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PAX9P55771 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.91□□□□□ -0.02
PAX9P55771 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.91□□□□□ -0.02
PAX9P55771 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.91□□□□□ -0.02
PAX9P55771 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PAX9P55771 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PAX9P55771 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PAX9P55771 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.91□□□□□ -0.02
PAX9P55771 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
PAX9P55771 MYLKP1-201ENST00000509077 1580 ntBASIC14.9□□□□□ -0.02
PAX9P55771 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.9□□□□□ -0.02
PAX9P55771 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.9□□□□□ -0.02
PAX9P55771 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.9□□□□□ -0.02
PAX9P55771 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.9□□□□□ -0.02
PAX9P55771 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.9□□□□□ -0.02
PAX9P55771 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PAX9P55771 C1QL1P1-201ENST00000568105 661 ntBASIC14.9□□□□□ -0.02
PAX9P55771 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.9□□□□□ -0.02
PAX9P55771 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.9□□□□□ -0.02
PAX9P55771 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PAX9P55771 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.9□□□□□ -0.02
PAX9P55771 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.9□□□□□ -0.02
PAX9P55771 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
PAX9P55771 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PAX9P55771 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 AC124067.4-201ENST00000519691 2379 ntBASIC14.89□□□□□ -0.03
PAX9P55771 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.89□□□□□ -0.03
PAX9P55771 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.89□□□□□ -0.03
PAX9P55771 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms