Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 APTR-201ENST00000398043 528 ntTSL 1 (best)15.33■□□□□ 0.045e-9■■□□□ 12.4
NCBP2P52298 RHNO1-203ENST00000464682 1605 ntTSL 215.1■□□□□ 0.015e-9■■□□□ 12.4
NCBP2P52298 NT5DC2-213ENST00000489316 772 ntTSL 514.62□□□□□ -0.075e-9■■□□□ 12.4
NCBP2P52298 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.085e-9■■□□□ 12.4
NCBP2P52298 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.095e-9■■□□□ 12.4
NCBP2P52298 RHNO1-207ENST00000538636 583 ntTSL 413.63□□□□□ -0.235e-9■■□□□ 12.4
NCBP2P52298 TULP3-205ENST00000540184 978 ntTSL 513.39□□□□□ -0.275e-9■■□□□ 12.4
NCBP2P52298 RHNO1-201ENST00000366285 517 ntTSL 512.01□□□□□ -0.495e-9■■□□□ 12.4
NCBP2P52298 PUS7-201ENST00000356362 3480 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.775e-9■■□□□ 12.4
NCBP2P52298 RHNO1-208ENST00000538700 580 ntTSL 43.85□□□□□ -1.795e-9■■□□□ 12.4
NCBP2P52298 RHNO1-206ENST00000536063 516 ntTSL 32.44□□□□□ -2.025e-9■■□□□ 12.4
NCBP2P52298 SUGP2-205ENST00000594445 732 ntTSL 323.19■■□□□ 1.36e-9■■□□□ 12.4
NCBP2P52298 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.186e-9■■□□□ 12.4
NCBP2P52298 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.196e-9■■□□□ 12.4
NCBP2P52298 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.216e-9■■□□□ 12.4
NCBP2P52298 SUGP2-213ENST00000600239 5565 ntTSL 213.42□□□□□ -0.266e-9■■□□□ 12.4
NCBP2P52298 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.316e-9■■□□□ 12.4
NCBP2P52298 SUGP2-210ENST00000598202 764 ntTSL 411.36□□□□□ -0.596e-9■■□□□ 12.4
NCBP2P52298 SUGP2-201ENST00000330854 3629 ntTSL 1 (best)9.07□□□□□ -0.966e-9■■□□□ 12.4
NCBP2P52298 SUGP2-206ENST00000594773 4169 ntTSL 28.93□□□□□ -0.986e-9■■□□□ 12.4
NCBP2P52298 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.162e-18■■□□□ 12.4
NCBP2P52298 AL121845.3-203ENST00000496820 507 ntTSL 520.97■□□□□ 0.952e-18■■□□□ 12.4
NCBP2P52298 LIME1-210ENST00000621325 2410 ntTSL 220.13■□□□□ 0.812e-18■■□□□ 12.4
NCBP2P52298 AL121845.3-202ENST00000632538 872 ntAPPRIS P1 TSL 319.8■□□□□ 0.762e-18■■□□□ 12.4
NCBP2P52298 LIME1-204ENST00000476183 809 ntAPPRIS ALT2 TSL 519.41■□□□□ 0.72e-18■■□□□ 12.4
NCBP2P52298 LIME1-207ENST00000489212 559 ntTSL 519.41■□□□□ 0.72e-18■■□□□ 12.4
NCBP2P52298 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.532e-18■■□□□ 12.4
NCBP2P52298 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.442e-18■■□□□ 12.4
NCBP2P52298 LIME1-202ENST00000444951 451 ntAPPRIS ALT2 TSL 316.09■□□□□ 0.172e-18■■□□□ 12.4
NCBP2P52298 LIME1-208ENST00000493265 661 ntAPPRIS ALT2 TSL 216.09■□□□□ 0.172e-18■■□□□ 12.4
NCBP2P52298 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.37■□□□□ 0.052e-18■■□□□ 12.4
NCBP2P52298 LIME1-209ENST00000494776 391 ntTSL 514.74□□□□□ -0.052e-18■■□□□ 12.4
NCBP2P52298 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.182e-18■■□□□ 12.4
NCBP2P52298 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.234e-7■■□□□ 12.4
NCBP2P52298 RTF1-202ENST00000462276 485 ntTSL 410.02□□□□□ -0.814e-7■■□□□ 12.4
NCBP2P52298 RTF1-205ENST00000558298 327 ntTSL 57.18□□□□□ -1.264e-7■■□□□ 12.4
NCBP2P52298 SNTB1-205ENST00000520717 559 ntTSL 226.7■■□□□ 1.863e-7■■□□□ 12.4
NCBP2P52298 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.353e-7■■□□□ 12.4
NCBP2P52298 ULK1-205ENST00000541761 1262 ntTSL 214.49□□□□□ -0.095e-7■■□□□ 12.4
NCBP2P52298 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.263e-16■■□□□ 12.4
NCBP2P52298 NHSL1-201ENST00000342260 736 ntAPPRIS ALT2 TSL 510.44□□□□□ -0.743e-16■■□□□ 12.4
NCBP2P52298 NHSL1-208ENST00000533765 568 ntAPPRIS ALT2 TSL 46.52□□□□□ -1.373e-16■■□□□ 12.4
NCBP2P52298 NHSL1-203ENST00000426841 947 ntTSL 25.32□□□□□ -1.563e-16■■□□□ 12.4
NCBP2P52298 AMDHD2-212ENST00000566706 940 ntTSL 520.88■□□□□ 0.932e-11■■□□□ 12.4
NCBP2P52298 AMDHD2-211ENST00000565963 844 ntTSL 519.24■□□□□ 0.672e-11■■□□□ 12.4
NCBP2P52298 AMDHD2-209ENST00000563633 1117 ntTSL 518.95■□□□□ 0.622e-11■■□□□ 12.4
NCBP2P52298 AMDHD2-214ENST00000567475 714 ntTSL 218.7■□□□□ 0.582e-11■■□□□ 12.4
NCBP2P52298 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.462e-11■■□□□ 12.4
NCBP2P52298 AMDHD2-217ENST00000569879 924 ntTSL 317.62■□□□□ 0.412e-11■■□□□ 12.4
NCBP2P52298 AMDHD2-208ENST00000563556 490 ntTSL 417.62■□□□□ 0.412e-11■■□□□ 12.4
NCBP2P52298 AMDHD2-216ENST00000569219 735 ntTSL 216.25■□□□□ 0.192e-11■■□□□ 12.4
NCBP2P52298 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.192e-11■■□□□ 12.4
NCBP2P52298 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.936e-18■■□□□ 12.4
NCBP2P52298 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.29■□□□□ 0.846e-18■■□□□ 12.4
NCBP2P52298 USPL1-202ENST00000465952 1133 ntTSL 215.52■□□□□ 0.083e-8■■□□□ 12.4
NCBP2P52298 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.243e-8■■□□□ 12.4
NCBP2P52298 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.82□□□□□ -1.323e-8■■□□□ 12.4
NCBP2P52298 RBM6-219ENST00000491874 480 ntTSL 314.14□□□□□ -0.151e-9■■□□□ 12.4
NCBP2P52298 RBM6-206ENST00000433811 582 ntTSL 313.42□□□□□ -0.261e-9■■□□□ 12.4
NCBP2P52298 RBM6-218ENST00000488807 675 ntTSL 511.73□□□□□ -0.531e-9■■□□□ 12.4
NCBP2P52298 USP15-206ENST00000546718 559 ntTSL 212.9□□□□□ -0.341e-7■■□□□ 12.4
NCBP2P52298 USP15-216ENST00000550632 728 ntTSL 312.84□□□□□ -0.351e-7■■□□□ 12.4
NCBP2P52298 USP15-217ENST00000551206 1022 ntTSL 212.01□□□□□ -0.491e-7■■□□□ 12.4
NCBP2P52298 MIR6125-201ENST00000618986 96 ntBASIC10.4□□□□□ -0.741e-7■■□□□ 12.4
NCBP2P52298 USP15-215ENST00000549523 584 ntTSL 510.13□□□□□ -0.791e-7■■□□□ 12.4
NCBP2P52298 USP15-204ENST00000537297 579 ntTSL 29.6□□□□□ -0.871e-7■■□□□ 12.4
NCBP2P52298 USP15-208ENST00000548524 648 ntTSL 28.73□□□□□ -1.011e-7■■□□□ 12.4
NCBP2P52298 USP15-202ENST00000312635 2226 ntTSL 1 (best) BASIC8.52□□□□□ -1.051e-7■■□□□ 12.4
NCBP2P52298 USP15-212ENST00000549237 791 ntTSL 35.79□□□□□ -1.481e-7■■□□□ 12.4
NCBP2P52298 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.551e-7■■□□□ 12.4
NCBP2P52298 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.921e-7■■□□□ 12.4
NCBP2P52298 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.37■■□□□ 1.013e-8■■□□□ 12.4
NCBP2P52298 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.13■□□□□ 0.653e-8■■□□□ 12.4
NCBP2P52298 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.313e-8■■□□□ 12.4
NCBP2P52298 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.94□□□□□ -0.022e-32■■□□□ 12.4
NCBP2P52298 C2orf42-212ENST00000470096 579 ntTSL 414.82□□□□□ -0.042e-32■■□□□ 12.4
NCBP2P52298 TIA1-219ENST00000496452 853 ntTSL 214.82□□□□□ -0.042e-32■■□□□ 12.4
NCBP2P52298 TIA1-213ENST00000481650 549 ntTSL 412.54□□□□□ -0.42e-32■■□□□ 12.4
NCBP2P52298 TIA1-210ENST00000474809 915 ntTSL 511.63□□□□□ -0.552e-32■■□□□ 12.4
NCBP2P52298 TIA1-203ENST00000415783 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.682e-32■■□□□ 12.4
NCBP2P52298 TIA1-205ENST00000433529 4647 ntTSL 2 BASIC10.54□□□□□ -0.722e-32■■□□□ 12.4
NCBP2P52298 TIA1-211ENST00000477044 904 ntTSL 57.2□□□□□ -1.262e-32■■□□□ 12.4
NCBP2P52298 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.87□□□□□ -1.312e-32■■□□□ 12.4
NCBP2P52298 UBE2G2-203ENST00000462569 762 ntTSL 219.42■□□□□ 0.73e-10■■□□□ 12.4
NCBP2P52298 UBE2G2-205ENST00000478200 637 ntTSL 419.42■□□□□ 0.73e-10■■□□□ 12.4
NCBP2P52298 UBE2G2-212ENST00000497664 590 ntTSL 419.42■□□□□ 0.73e-10■■□□□ 12.4
NCBP2P52298 UBE2G2-207ENST00000490091 1512 ntTSL 1 (best)17.78■□□□□ 0.443e-10■■□□□ 12.4
NCBP2P52298 UBE2G2-209ENST00000491513 744 ntTSL 417.48■□□□□ 0.393e-10■■□□□ 12.4
NCBP2P52298 UBE2G2-211ENST00000497630 933 ntTSL 217.34■□□□□ 0.373e-10■■□□□ 12.4
NCBP2P52298 UBE2G2-204ENST00000477954 1034 ntTSL 314.38□□□□□ -0.113e-10■■□□□ 12.4
NCBP2P52298 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.18□□□□□ -0.143e-10■■□□□ 12.4
NCBP2P52298 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.223e-10■■□□□ 12.4
NCBP2P52298 UBE2G2-208ENST00000490450 424 ntTSL 36.5□□□□□ -1.373e-10■■□□□ 12.4
NCBP2P52298 UBE2G2-210ENST00000496395 288 ntTSL 53.26□□□□□ -1.893e-10■■□□□ 12.4
NCBP2P52298 PABPC1L-216ENST00000490798 1384 ntTSL 317.81■□□□□ 0.445e-11■■□□□ 12.4
NCBP2P52298 HIF1AN-203ENST00000526476 708 ntTSL 317.45■□□□□ 0.382e-11■■□□□ 12.4
NCBP2P52298 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.282e-11■■□□□ 12.4
NCBP2P52298 SPC24-207ENST00000592967 833 ntTSL 315.11■□□□□ 0.012e-11■■□□□ 12.4
NCBP2P52298 SPC24-203ENST00000585567 633 ntTSL 314.14□□□□□ -0.152e-11■■□□□ 12.4
NCBP2P52298 SPC24-201ENST00000423327 840 ntTSL 214.14□□□□□ -0.152e-11■■□□□ 12.4
Retrieved 100 of 18,329 protein–RNA pairs in 163.8 ms