Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF144AP50876 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RNF144AP50876 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RNF144AP50876 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RNF144AP50876 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF144AP50876 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 KRT8P9-201ENST00000558927 1449 ntBASIC17.29■□□□□ 0.36
RNF144AP50876 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF144AP50876 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF144AP50876 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF144AP50876 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF144AP50876 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF144AP50876 AC093525.10-201ENST00000625130 1569 ntBASIC17.28■□□□□ 0.36
RNF144AP50876 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF144AP50876 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF144AP50876 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF144AP50876 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RNF144AP50876 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF144AP50876 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF144AP50876 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF144AP50876 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF144AP50876 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF144AP50876 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RNF144AP50876 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF144AP50876 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF144AP50876 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF144AP50876 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF144AP50876 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RNF144AP50876 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF144AP50876 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.28■□□□□ 0.36
RNF144AP50876 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF144AP50876 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RNF144AP50876 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF144AP50876 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF144AP50876 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF144AP50876 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RNF144AP50876 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF144AP50876 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF144AP50876 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF144AP50876 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF144AP50876 AC096733.2-201ENST00000609937 1394 ntBASIC17.28■□□□□ 0.36
RNF144AP50876 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF144AP50876 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF144AP50876 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF144AP50876 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF144AP50876 GPAT2P1-201ENST00000444924 1672 ntBASIC17.27■□□□□ 0.36
RNF144AP50876 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RNF144AP50876 AC135050.7-201ENST00000624508 2218 ntBASIC17.27■□□□□ 0.36
RNF144AP50876 AC090340.1-201ENST00000620778 4980 ntBASIC17.27■□□□□ 0.36
RNF144AP50876 AC008556.1-201ENST00000610908 2040 ntBASIC17.27■□□□□ 0.36
RNF144AP50876 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
RNF144AP50876 UNC93B2-201ENST00000285383 730 ntBASIC17.27■□□□□ 0.36
RNF144AP50876 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF144AP50876 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF144AP50876 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF144AP50876 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF144AP50876 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF144AP50876 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF144AP50876 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF144AP50876 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF144AP50876 DGCR10-201ENST00000609839 495 ntBASIC17.27■□□□□ 0.36
RNF144AP50876 AC068587.9-201ENST00000641814 219 ntBASIC17.27■□□□□ 0.36
RNF144AP50876 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF144AP50876 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
RNF144AP50876 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF144AP50876 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RNF144AP50876 KRT8P3-201ENST00000519669 1449 ntBASIC17.27■□□□□ 0.35
RNF144AP50876 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.27■□□□□ 0.35
RNF144AP50876 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF144AP50876 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RNF144AP50876 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF144AP50876 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF144AP50876 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF144AP50876 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF144AP50876 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF144AP50876 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF144AP50876 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF144AP50876 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF144AP50876 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF144AP50876 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RNF144AP50876 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF144AP50876 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF144AP50876 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF144AP50876 KRT8P32-201ENST00000512863 1461 ntBASIC17.26■□□□□ 0.35
RNF144AP50876 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RNF144AP50876 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RNF144AP50876 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF144AP50876 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms