Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.5■□□□□ 0.23
SRP9P49458 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.5■□□□□ 0.23
SRP9P49458 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.5■□□□□ 0.23
SRP9P49458 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.5■□□□□ 0.23
SRP9P49458 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRP9P49458 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SRP9P49458 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRP9P49458 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRP9P49458 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRP9P49458 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.49■□□□□ 0.23
SRP9P49458 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.49■□□□□ 0.23
SRP9P49458 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.49■□□□□ 0.23
SRP9P49458 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRP9P49458 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.49■□□□□ 0.23
SRP9P49458 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.49■□□□□ 0.23
SRP9P49458 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.49■□□□□ 0.23
SRP9P49458 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRP9P49458 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRP9P49458 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRP9P49458 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRP9P49458 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
SRP9P49458 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SRP9P49458 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRP9P49458 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRP9P49458 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SRP9P49458 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
SRP9P49458 AL353708.3-201ENST00000610272 989 ntBASIC16.49■□□□□ 0.23
SRP9P49458 IRX1P1-201ENST00000438849 1838 ntBASIC16.49■□□□□ 0.23
SRP9P49458 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SRP9P49458 HTR7P1-202ENST00000624664 4411 ntBASIC16.49■□□□□ 0.23
SRP9P49458 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
SRP9P49458 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.49■□□□□ 0.23
SRP9P49458 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SRP9P49458 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.48■□□□□ 0.23
SRP9P49458 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.48■□□□□ 0.23
SRP9P49458 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRP9P49458 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP9P49458 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.48■□□□□ 0.23
SRP9P49458 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP9P49458 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.48■□□□□ 0.23
SRP9P49458 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SRP9P49458 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP9P49458 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP9P49458 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SRP9P49458 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRP9P49458 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRP9P49458 AC012618.2-201ENST00000428058 849 ntBASIC16.48■□□□□ 0.23
SRP9P49458 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.48■□□□□ 0.23
SRP9P49458 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.48■□□□□ 0.23
SRP9P49458 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.48■□□□□ 0.23
SRP9P49458 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.48■□□□□ 0.23
SRP9P49458 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.48■□□□□ 0.23
SRP9P49458 AF186192.3-201ENST00000583427 947 ntBASIC16.48■□□□□ 0.23
SRP9P49458 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.48■□□□□ 0.23
SRP9P49458 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SRP9P49458 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP9P49458 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRP9P49458 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRP9P49458 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SRP9P49458 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP9P49458 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SRP9P49458 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SRP9P49458 AC009053.2-201ENST00000563701 2365 ntBASIC16.48■□□□□ 0.23
SRP9P49458 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SRP9P49458 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.48■□□□□ 0.23
SRP9P49458 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SRP9P49458 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SRP9P49458 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SRP9P49458 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SRP9P49458 RPS2P55-201ENST00000397318 883 ntBASIC16.47■□□□□ 0.23
SRP9P49458 NIFKP9-201ENST00000419265 221 ntBASIC16.47■□□□□ 0.23
SRP9P49458 KSR1P1-201ENST00000446298 240 ntBASIC16.47■□□□□ 0.23
SRP9P49458 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SRP9P49458 AC107956.1-201ENST00000494359 873 ntBASIC16.47■□□□□ 0.23
SRP9P49458 AC008550.1-201ENST00000511500 884 ntBASIC16.47■□□□□ 0.23
SRP9P49458 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.47■□□□□ 0.23
SRP9P49458 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.47■□□□□ 0.23
SRP9P49458 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.47■□□□□ 0.23
SRP9P49458 AC073195.1-201ENST00000607241 877 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms