Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNTAP49354 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
FNTAP49354 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNTAP49354 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
FNTAP49354 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.32■□□□□ 0.68
FNTAP49354 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNTAP49354 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNTAP49354 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
FNTAP49354 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
FNTAP49354 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FNTAP49354 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.32■□□□□ 0.68
FNTAP49354 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.32■□□□□ 0.68
FNTAP49354 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.32■□□□□ 0.68
FNTAP49354 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FNTAP49354 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FNTAP49354 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNTAP49354 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FNTAP49354 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNTAP49354 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
FNTAP49354 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
FNTAP49354 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNTAP49354 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNTAP49354 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNTAP49354 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FNTAP49354 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.32■□□□□ 0.68
FNTAP49354 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.32■□□□□ 0.68
FNTAP49354 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FNTAP49354 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.32■□□□□ 0.68
FNTAP49354 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.31■□□□□ 0.68
FNTAP49354 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.31■□□□□ 0.68
FNTAP49354 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.31■□□□□ 0.68
FNTAP49354 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.31■□□□□ 0.68
FNTAP49354 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FNTAP49354 ESPNP-201ENST00000270691 2015 ntBASIC19.31■□□□□ 0.68
FNTAP49354 PCDHA12-202ENST00000613593 2588 ntBASIC19.31■□□□□ 0.68
FNTAP49354 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNTAP49354 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
FNTAP49354 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FNTAP49354 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNTAP49354 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNTAP49354 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNTAP49354 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
FNTAP49354 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
FNTAP49354 SLC25A6P5-201ENST00000435663 894 ntBASIC19.31■□□□□ 0.68
FNTAP49354 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.31■□□□□ 0.68
FNTAP49354 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FNTAP49354 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.31■□□□□ 0.68
FNTAP49354 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
FNTAP49354 AC131212.4-201ENST00000623606 975 ntBASIC19.31■□□□□ 0.68
FNTAP49354 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.31■□□□□ 0.68
FNTAP49354 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNTAP49354 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.31■□□□□ 0.68
FNTAP49354 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FNTAP49354 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FNTAP49354 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
FNTAP49354 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.31■□□□□ 0.68
FNTAP49354 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.31■□□□□ 0.68
FNTAP49354 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FNTAP49354 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.3■□□□□ 0.68
FNTAP49354 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNTAP49354 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
FNTAP49354 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNTAP49354 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNTAP49354 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.3■□□□□ 0.68
FNTAP49354 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.3■□□□□ 0.68
FNTAP49354 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
FNTAP49354 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.3■□□□□ 0.68
FNTAP49354 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.3■□□□□ 0.68
FNTAP49354 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.3■□□□□ 0.68
FNTAP49354 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.3■□□□□ 0.68
FNTAP49354 AC004980.1-204ENST00000429707 299 ntBASIC19.3■□□□□ 0.68
FNTAP49354 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
FNTAP49354 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.3■□□□□ 0.68
FNTAP49354 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FNTAP49354 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.3■□□□□ 0.68
FNTAP49354 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNTAP49354 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNTAP49354 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNTAP49354 AC008556.1-201ENST00000610908 2040 ntBASIC19.3■□□□□ 0.68
FNTAP49354 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNTAP49354 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
FNTAP49354 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNTAP49354 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FNTAP49354 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FNTAP49354 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.3■□□□□ 0.68
FNTAP49354 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FNTAP49354 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.3■□□□□ 0.68
FNTAP49354 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FNTAP49354 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FNTAP49354 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FNTAP49354 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FNTAP49354 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FNTAP49354 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.29■□□□□ 0.68
FNTAP49354 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FNTAP49354 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FNTAP49354 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.29■□□□□ 0.68
FNTAP49354 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.29■□□□□ 0.68
FNTAP49354 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.29■□□□□ 0.68
FNTAP49354 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FNTAP49354 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms