Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CX3CR1P49238 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CX3CR1P49238 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CX3CR1P49238 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CX3CR1P49238 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CX3CR1P49238 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CX3CR1P49238 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CX3CR1P49238 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CX3CR1P49238 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.35■□□□□ 0.21
CX3CR1P49238 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CX3CR1P49238 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CX3CR1P49238 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.35■□□□□ 0.21
CX3CR1P49238 MESTP1-201ENST00000404287 994 ntBASIC16.35■□□□□ 0.21
CX3CR1P49238 AC098590.1-201ENST00000468126 897 ntBASIC16.35■□□□□ 0.21
CX3CR1P49238 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CX3CR1P49238 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.35■□□□□ 0.21
CX3CR1P49238 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.35■□□□□ 0.21
CX3CR1P49238 AL499627.1-201ENST00000569373 2188 ntBASIC16.35■□□□□ 0.21
CX3CR1P49238 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.35■□□□□ 0.21
CX3CR1P49238 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CX3CR1P49238 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.35■□□□□ 0.21
CX3CR1P49238 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CX3CR1P49238 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CX3CR1P49238 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.35■□□□□ 0.21
CX3CR1P49238 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.35■□□□□ 0.21
CX3CR1P49238 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CX3CR1P49238 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CX3CR1P49238 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.35■□□□□ 0.21
CX3CR1P49238 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CX3CR1P49238 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CX3CR1P49238 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CX3CR1P49238 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CX3CR1P49238 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.34■□□□□ 0.21
CX3CR1P49238 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CX3CR1P49238 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CX3CR1P49238 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CX3CR1P49238 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CX3CR1P49238 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CX3CR1P49238 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CX3CR1P49238 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CX3CR1P49238 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CX3CR1P49238 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
CX3CR1P49238 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.34■□□□□ 0.21
CX3CR1P49238 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.34■□□□□ 0.21
CX3CR1P49238 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.34■□□□□ 0.21
CX3CR1P49238 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.34■□□□□ 0.21
CX3CR1P49238 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CX3CR1P49238 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.34■□□□□ 0.21
CX3CR1P49238 AP000692.2-201ENST00000608391 879 ntBASIC16.34■□□□□ 0.21
CX3CR1P49238 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CX3CR1P49238 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CX3CR1P49238 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CX3CR1P49238 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CX3CR1P49238 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CX3CR1P49238 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.34■□□□□ 0.21
CX3CR1P49238 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.34■□□□□ 0.21
CX3CR1P49238 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CX3CR1P49238 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.34■□□□□ 0.21
CX3CR1P49238 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CX3CR1P49238 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CX3CR1P49238 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
CX3CR1P49238 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CX3CR1P49238 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CX3CR1P49238 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CX3CR1P49238 AL357033.4-201ENST00000617703 1807 ntBASIC16.33■□□□□ 0.21
CX3CR1P49238 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CX3CR1P49238 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CX3CR1P49238 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CX3CR1P49238 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CX3CR1P49238 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CX3CR1P49238 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.33■□□□□ 0.2
CX3CR1P49238 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CX3CR1P49238 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CX3CR1P49238 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.33■□□□□ 0.2
CX3CR1P49238 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.33■□□□□ 0.2
CX3CR1P49238 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.33■□□□□ 0.2
CX3CR1P49238 UBE2SP1-201ENST00000450587 669 ntBASIC16.33■□□□□ 0.2
CX3CR1P49238 MYC-208ENST00000641036 567 ntBASIC16.33■□□□□ 0.2
CX3CR1P49238 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CX3CR1P49238 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CX3CR1P49238 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.33■□□□□ 0.2
CX3CR1P49238 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.33■□□□□ 0.2
CX3CR1P49238 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
CX3CR1P49238 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CX3CR1P49238 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CX3CR1P49238 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.33■□□□□ 0.2
CX3CR1P49238 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CX3CR1P49238 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CX3CR1P49238 BICD1-207ENST00000551848 1962 ntBASIC16.33■□□□□ 0.2
CX3CR1P49238 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CX3CR1P49238 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CX3CR1P49238 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CX3CR1P49238 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CX3CR1P49238 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.33■□□□□ 0.2
CX3CR1P49238 OR6D1P-202ENST00000641007 5290 ntBASIC16.32■□□□□ 0.2
CX3CR1P49238 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CX3CR1P49238 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.32■□□□□ 0.2
CX3CR1P49238 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CX3CR1P49238 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CX3CR1P49238 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms