Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC1A1P43005 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC1A1P43005 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.47■□□□□ 0.71
SLC1A1P43005 RPS2P55-201ENST00000397318 883 ntBASIC19.47■□□□□ 0.71
SLC1A1P43005 AC107956.1-201ENST00000494359 873 ntBASIC19.47■□□□□ 0.71
SLC1A1P43005 AC093677.2-201ENST00000600169 1863 ntBASIC19.47■□□□□ 0.71
SLC1A1P43005 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC1A1P43005 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC1A1P43005 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC1A1P43005 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC1A1P43005 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC1A1P43005 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC1A1P43005 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC1A1P43005 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC1A1P43005 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SLC1A1P43005 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
SLC1A1P43005 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC1A1P43005 ABHD17AP1-201ENST00000358206 933 ntBASIC19.46■□□□□ 0.71
SLC1A1P43005 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC1A1P43005 AC012618.2-201ENST00000428058 849 ntBASIC19.46■□□□□ 0.71
SLC1A1P43005 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC1A1P43005 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC1A1P43005 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC1A1P43005 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC1A1P43005 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC1A1P43005 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC1A1P43005 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC1A1P43005 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC1A1P43005 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC1A1P43005 AC034236.2-201ENST00000606662 1610 ntBASIC19.46■□□□□ 0.71
SLC1A1P43005 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC1A1P43005 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SLC1A1P43005 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC1A1P43005 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC1A1P43005 GPAT2P1-201ENST00000444924 1672 ntBASIC19.46■□□□□ 0.71
SLC1A1P43005 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC1A1P43005 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SLC1A1P43005 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
SLC1A1P43005 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC1A1P43005 AC018470.1-201ENST00000624790 3129 ntBASIC19.45■□□□□ 0.7
SLC1A1P43005 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC1A1P43005 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC1A1P43005 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC1A1P43005 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.45■□□□□ 0.7
SLC1A1P43005 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC1A1P43005 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC1A1P43005 AC097488.1-201ENST00000507834 756 ntBASIC19.45■□□□□ 0.7
SLC1A1P43005 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC1A1P43005 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC1A1P43005 AC233702.5-201ENST00000584107 538 ntBASIC19.45■□□□□ 0.7
SLC1A1P43005 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC1A1P43005 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SLC1A1P43005 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC1A1P43005 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC1A1P43005 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC1A1P43005 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC1A1P43005 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC1A1P43005 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC1A1P43005 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC1A1P43005 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC1A1P43005 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SLC1A1P43005 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC1A1P43005 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC1A1P43005 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SLC1A1P43005 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 GCSHP5-201ENST00000443090 522 ntBASIC19.44■□□□□ 0.7
SLC1A1P43005 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC1A1P43005 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SLC1A1P43005 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
SLC1A1P43005 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SLC1A1P43005 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC1A1P43005 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SLC1A1P43005 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC1A1P43005 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC1A1P43005 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC1A1P43005 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC1A1P43005 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC1A1P43005 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC1A1P43005 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms