Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC1A3P43003 ANO7L1-203ENST00000602586 1720 ntBASIC17.11■□□□□ 0.33
SLC1A3P43003 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC1A3P43003 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A3P43003 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
SLC1A3P43003 UNC93B2-201ENST00000285383 730 ntBASIC17.11■□□□□ 0.33
SLC1A3P43003 CRYGFP-201ENST00000418459 633 ntBASIC17.11■□□□□ 0.33
SLC1A3P43003 CA15P1-201ENST00000481698 905 ntBASIC17.11■□□□□ 0.33
SLC1A3P43003 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC1A3P43003 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A3P43003 AP005242.2-201ENST00000580065 1175 ntBASIC17.11■□□□□ 0.33
SLC1A3P43003 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC1A3P43003 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A3P43003 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC1A3P43003 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC1A3P43003 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC1A3P43003 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A3P43003 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A3P43003 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A3P43003 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A3P43003 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC1A3P43003 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A3P43003 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A3P43003 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SLC1A3P43003 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A3P43003 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A3P43003 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC1A3P43003 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC1A3P43003 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC1A3P43003 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A3P43003 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A3P43003 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A3P43003 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC1A3P43003 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC1A3P43003 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC1A3P43003 KRT17P2-201ENST00000300992 1314 ntBASIC17.1■□□□□ 0.33
SLC1A3P43003 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC1A3P43003 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC1A3P43003 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A3P43003 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC1A3P43003 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A3P43003 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC1A3P43003 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC1A3P43003 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A3P43003 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC1A3P43003 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A3P43003 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLC1A3P43003 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A3P43003 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A3P43003 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 AC068880.1-201ENST00000507289 2297 ntBASIC17.09■□□□□ 0.33
SLC1A3P43003 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A3P43003 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
SLC1A3P43003 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLC1A3P43003 RBM17P1-201ENST00000453646 1190 ntBASIC17.09■□□□□ 0.33
SLC1A3P43003 SNORA78-201ENST00000459373 127 ntBASIC17.09■□□□□ 0.33
SLC1A3P43003 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A3P43003 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLC1A3P43003 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.09■□□□□ 0.33
SLC1A3P43003 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC1A3P43003 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A3P43003 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.09■□□□□ 0.33
SLC1A3P43003 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A3P43003 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.09■□□□□ 0.33
SLC1A3P43003 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLC1A3P43003 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLC1A3P43003 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A3P43003 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC1A3P43003 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC1A3P43003 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.08■□□□□ 0.33
SLC1A3P43003 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.08■□□□□ 0.33
SLC1A3P43003 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC1A3P43003 RCC2P3-201ENST00000418112 1537 ntBASIC17.08■□□□□ 0.32
SLC1A3P43003 MTMR9LP-203ENST00000426597 1545 ntBASIC17.08■□□□□ 0.32
SLC1A3P43003 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A3P43003 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.08■□□□□ 0.32
SLC1A3P43003 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A3P43003 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SLC1A3P43003 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC1A3P43003 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.08■□□□□ 0.32
SLC1A3P43003 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC1A3P43003 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms