Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF9P41273 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.09■□□□□ 0.81
TNFSF9P41273 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.09■□□□□ 0.81
TNFSF9P41273 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.09■□□□□ 0.81
TNFSF9P41273 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
TNFSF9P41273 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
TNFSF9P41273 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.09■□□□□ 0.81
TNFSF9P41273 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.09■□□□□ 0.81
TNFSF9P41273 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.09■□□□□ 0.81
TNFSF9P41273 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF9P41273 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF9P41273 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.09■□□□□ 0.81
TNFSF9P41273 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF9P41273 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF9P41273 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
TNFSF9P41273 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF9P41273 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF9P41273 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TNFSF9P41273 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF9P41273 AC004408.2-201ENST00000623613 2777 ntBASIC20.08■□□□□ 0.81
TNFSF9P41273 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF9P41273 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.08■□□□□ 0.81
TNFSF9P41273 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF9P41273 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF9P41273 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
TNFSF9P41273 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF9P41273 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF9P41273 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF9P41273 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF9P41273 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF9P41273 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.08■□□□□ 0.81
TNFSF9P41273 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.08■□□□□ 0.81
TNFSF9P41273 VENTXP5-201ENST00000523979 775 ntBASIC20.08■□□□□ 0.81
TNFSF9P41273 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.08■□□□□ 0.81
TNFSF9P41273 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.08■□□□□ 0.81
TNFSF9P41273 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.08■□□□□ 0.81
TNFSF9P41273 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.08■□□□□ 0.81
TNFSF9P41273 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.08■□□□□ 0.81
TNFSF9P41273 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TNFSF9P41273 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
TNFSF9P41273 MYLKP1-201ENST00000509077 1580 ntBASIC20.08■□□□□ 0.8
TNFSF9P41273 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.08■□□□□ 0.8
TNFSF9P41273 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.07■□□□□ 0.8
TNFSF9P41273 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF9P41273 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF9P41273 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.07■□□□□ 0.8
TNFSF9P41273 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.07■□□□□ 0.8
TNFSF9P41273 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TNFSF9P41273 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.07■□□□□ 0.8
TNFSF9P41273 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.07■□□□□ 0.8
TNFSF9P41273 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF9P41273 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF9P41273 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF9P41273 FAM86EP-206ENST00000510506 987 ntBASIC20.07■□□□□ 0.8
TNFSF9P41273 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.07■□□□□ 0.8
TNFSF9P41273 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.07■□□□□ 0.8
TNFSF9P41273 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.07■□□□□ 0.8
TNFSF9P41273 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.07■□□□□ 0.8
TNFSF9P41273 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.07■□□□□ 0.8
TNFSF9P41273 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TNFSF9P41273 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF9P41273 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TNFSF9P41273 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF9P41273 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.07■□□□□ 0.8
TNFSF9P41273 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
TNFSF9P41273 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.07■□□□□ 0.8
TNFSF9P41273 AL163051.1-201ENST00000569214 1512 ntBASIC20.07■□□□□ 0.8
TNFSF9P41273 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF9P41273 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.06■□□□□ 0.8
TNFSF9P41273 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF9P41273 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF9P41273 AC126763.1-201ENST00000552015 2118 ntBASIC20.06■□□□□ 0.8
TNFSF9P41273 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.06■□□□□ 0.8
TNFSF9P41273 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.06■□□□□ 0.8
TNFSF9P41273 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.06■□□□□ 0.8
TNFSF9P41273 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.06■□□□□ 0.8
TNFSF9P41273 AL391807.1-203ENST00000604392 2365 ntBASIC20.06■□□□□ 0.8
TNFSF9P41273 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TNFSF9P41273 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF9P41273 AP000593.1-201ENST00000393668 712 ntBASIC20.06■□□□□ 0.8
TNFSF9P41273 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.06■□□□□ 0.8
TNFSF9P41273 AC112777.1-201ENST00000540175 1423 ntBASIC20.06■□□□□ 0.8
TNFSF9P41273 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF9P41273 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF9P41273 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF9P41273 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF9P41273 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF9P41273 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF9P41273 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF9P41273 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF9P41273 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF9P41273 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF9P41273 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TNFSF9P41273 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF9P41273 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.05■□□□□ 0.8
TNFSF9P41273 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.05■□□□□ 0.8
TNFSF9P41273 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF9P41273 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.05■□□□□ 0.8
TNFSF9P41273 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF9P41273 ZNF444P1-201ENST00000559497 298 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms