Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17■□□□□ 0.31
RFC3P40938 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
RFC3P40938 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFC3P40938 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFC3P40938 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFC3P40938 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RFC3P40938 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17■□□□□ 0.31
RFC3P40938 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFC3P40938 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFC3P40938 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17■□□□□ 0.31
RFC3P40938 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17■□□□□ 0.31
RFC3P40938 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17■□□□□ 0.31
RFC3P40938 SEC1P-202ENST00000473944 940 ntBASIC17■□□□□ 0.31
RFC3P40938 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17■□□□□ 0.31
RFC3P40938 AL136038.3-201ENST00000561909 1096 ntBASIC17■□□□□ 0.31
RFC3P40938 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17■□□□□ 0.31
RFC3P40938 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17■□□□□ 0.31
RFC3P40938 AL157888.1-201ENST00000631930 593 ntBASIC17■□□□□ 0.31
RFC3P40938 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFC3P40938 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17■□□□□ 0.31
RFC3P40938 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
RFC3P40938 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFC3P40938 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFC3P40938 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17■□□□□ 0.31
RFC3P40938 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RFC3P40938 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC3P40938 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC3P40938 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC3P40938 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RFC3P40938 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC3P40938 HBZP1-201ENST00000354915 429 ntBASIC16.99■□□□□ 0.31
RFC3P40938 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFC3P40938 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFC3P40938 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.99■□□□□ 0.31
RFC3P40938 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.99■□□□□ 0.31
RFC3P40938 KRT18P23-201ENST00000435622 1283 ntBASIC16.99■□□□□ 0.31
RFC3P40938 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.99■□□□□ 0.31
RFC3P40938 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.99■□□□□ 0.31
RFC3P40938 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.99■□□□□ 0.31
RFC3P40938 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.99■□□□□ 0.31
RFC3P40938 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
RFC3P40938 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.99■□□□□ 0.31
RFC3P40938 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.99■□□□□ 0.31
RFC3P40938 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC3P40938 AL109659.2-201ENST00000606809 1674 ntBASIC16.99■□□□□ 0.31
RFC3P40938 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC3P40938 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC3P40938 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC3P40938 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC3P40938 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC3P40938 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
RFC3P40938 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC3P40938 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC3P40938 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC3P40938 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC3P40938 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.98■□□□□ 0.31
RFC3P40938 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.98■□□□□ 0.31
RFC3P40938 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
RFC3P40938 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RFC3P40938 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.98■□□□□ 0.31
RFC3P40938 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RFC3P40938 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.98■□□□□ 0.31
RFC3P40938 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.98■□□□□ 0.31
RFC3P40938 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 KRT18P56-201ENST00000507275 550 ntBASIC16.98■□□□□ 0.31
RFC3P40938 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.98■□□□□ 0.31
RFC3P40938 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.98■□□□□ 0.31
RFC3P40938 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RFC3P40938 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
RFC3P40938 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 AL049812.1-201ENST00000432563 2267 ntBASIC16.98■□□□□ 0.31
RFC3P40938 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC3P40938 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC3P40938 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RFC3P40938 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.97■□□□□ 0.31
RFC3P40938 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC3P40938 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFC3P40938 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC3P40938 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC3P40938 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.97■□□□□ 0.31
RFC3P40938 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
RFC3P40938 AC138932.1-201ENST00000534164 6830 ntBASIC16.97■□□□□ 0.31
RFC3P40938 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC3P40938 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.97■□□□□ 0.31
RFC3P40938 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms