Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
GRIK1P39086 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
GRIK1P39086 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GRIK1P39086 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GRIK1P39086 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
GRIK1P39086 UPK3BP1-201ENST00000428678 509 ntBASIC19.58■□□□□ 0.72
GRIK1P39086 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.58■□□□□ 0.72
GRIK1P39086 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.58■□□□□ 0.72
GRIK1P39086 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.58■□□□□ 0.72
GRIK1P39086 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.58■□□□□ 0.72
GRIK1P39086 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.58■□□□□ 0.72
GRIK1P39086 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.58■□□□□ 0.72
GRIK1P39086 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.58■□□□□ 0.72
GRIK1P39086 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
GRIK1P39086 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GRIK1P39086 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GRIK1P39086 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GRIK1P39086 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GRIK1P39086 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
GRIK1P39086 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
GRIK1P39086 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GRIK1P39086 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GRIK1P39086 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GRIK1P39086 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GRIK1P39086 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.57■□□□□ 0.72
GRIK1P39086 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.57■□□□□ 0.72
GRIK1P39086 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.57■□□□□ 0.72
GRIK1P39086 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.57■□□□□ 0.72
GRIK1P39086 AC079602.3-201ENST00000623931 403 ntBASIC19.57■□□□□ 0.72
GRIK1P39086 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
GRIK1P39086 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
GRIK1P39086 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GRIK1P39086 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
GRIK1P39086 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
GRIK1P39086 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GRIK1P39086 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
GRIK1P39086 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
GRIK1P39086 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GRIK1P39086 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.57■□□□□ 0.72
GRIK1P39086 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GRIK1P39086 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GRIK1P39086 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.56■□□□□ 0.72
GRIK1P39086 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GRIK1P39086 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
GRIK1P39086 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.56■□□□□ 0.72
GRIK1P39086 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
GRIK1P39086 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
GRIK1P39086 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GRIK1P39086 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.56■□□□□ 0.72
GRIK1P39086 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.56■□□□□ 0.72
GRIK1P39086 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.56■□□□□ 0.72
GRIK1P39086 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.56■□□□□ 0.72
GRIK1P39086 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.56■□□□□ 0.72
GRIK1P39086 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.56■□□□□ 0.72
GRIK1P39086 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.56■□□□□ 0.72
GRIK1P39086 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.56■□□□□ 0.72
GRIK1P39086 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GRIK1P39086 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.56■□□□□ 0.72
GRIK1P39086 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
GRIK1P39086 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
GRIK1P39086 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GRIK1P39086 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GRIK1P39086 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.56■□□□□ 0.72
GRIK1P39086 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRIK1P39086 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRIK1P39086 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.55■□□□□ 0.72
GRIK1P39086 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.55■□□□□ 0.72
GRIK1P39086 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRIK1P39086 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRIK1P39086 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
GRIK1P39086 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.55■□□□□ 0.72
GRIK1P39086 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GRIK1P39086 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.55■□□□□ 0.72
GRIK1P39086 SPDYE13P-201ENST00000445314 798 ntBASIC19.55■□□□□ 0.72
GRIK1P39086 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.55■□□□□ 0.72
GRIK1P39086 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.55■□□□□ 0.72
GRIK1P39086 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GRIK1P39086 AL136038.4-201ENST00000603606 1261 ntBASIC19.55■□□□□ 0.72
GRIK1P39086 AC116407.4-201ENST00000623319 1061 ntBASIC19.55■□□□□ 0.72
GRIK1P39086 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.55■□□□□ 0.72
GRIK1P39086 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.55■□□□□ 0.72
GRIK1P39086 AL391807.1-203ENST00000604392 2365 ntBASIC19.55■□□□□ 0.72
GRIK1P39086 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
GRIK1P39086 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GRIK1P39086 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GRIK1P39086 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.54■□□□□ 0.72
GRIK1P39086 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
GRIK1P39086 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.54■□□□□ 0.72
GRIK1P39086 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
GRIK1P39086 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
GRIK1P39086 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GRIK1P39086 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
GRIK1P39086 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.54■□□□□ 0.72
GRIK1P39086 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.54■□□□□ 0.72
GRIK1P39086 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GRIK1P39086 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GRIK1P39086 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GRIK1P39086 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GRIK1P39086 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.54■□□□□ 0.72
GRIK1P39086 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms