Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC005082.1-201ENST00000413042 2259 ntBASIC18.49■□□□□ 0.55
HMGCLP35914 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLP35914 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.49■□□□□ 0.55
HMGCLP35914 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLP35914 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLP35914 KRT18P57-201ENST00000443599 1254 ntBASIC18.49■□□□□ 0.55
HMGCLP35914 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.49■□□□□ 0.55
HMGCLP35914 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLP35914 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.49■□□□□ 0.55
HMGCLP35914 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLP35914 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLP35914 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLP35914 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.49■□□□□ 0.55
HMGCLP35914 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLP35914 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.49■□□□□ 0.55
HMGCLP35914 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLP35914 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HMGCLP35914 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.49■□□□□ 0.55
HMGCLP35914 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HMGCLP35914 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
HMGCLP35914 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.49■□□□□ 0.55
HMGCLP35914 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLP35914 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.49■□□□□ 0.55
HMGCLP35914 AL163051.1-201ENST00000569214 1512 ntBASIC18.49■□□□□ 0.55
HMGCLP35914 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.49■□□□□ 0.55
HMGCLP35914 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLP35914 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.48■□□□□ 0.55
HMGCLP35914 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLP35914 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HMGCLP35914 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLP35914 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HMGCLP35914 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLP35914 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLP35914 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.48■□□□□ 0.55
HMGCLP35914 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.48■□□□□ 0.55
HMGCLP35914 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLP35914 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HMGCLP35914 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
HMGCLP35914 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLP35914 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLP35914 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.48■□□□□ 0.55
HMGCLP35914 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.48■□□□□ 0.55
HMGCLP35914 AC140113.3-201ENST00000605663 199 ntBASIC18.48■□□□□ 0.55
HMGCLP35914 AL023973.1-201ENST00000624619 620 ntBASIC18.48■□□□□ 0.55
HMGCLP35914 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HMGCLP35914 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
HMGCLP35914 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLP35914 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLP35914 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
HMGCLP35914 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.48■□□□□ 0.55
HMGCLP35914 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.48■□□□□ 0.55
HMGCLP35914 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.48■□□□□ 0.55
HMGCLP35914 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.48■□□□□ 0.55
HMGCLP35914 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLP35914 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLP35914 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLP35914 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLP35914 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLP35914 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HMGCLP35914 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 AC117947.1-201ENST00000427448 529 ntBASIC18.47■□□□□ 0.55
HMGCLP35914 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLP35914 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLP35914 YBX1P2-201ENST00000489612 999 ntBASIC18.47■□□□□ 0.55
HMGCLP35914 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.47■□□□□ 0.55
HMGCLP35914 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.47■□□□□ 0.55
HMGCLP35914 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLP35914 GCSHP2-201ENST00000560971 527 ntBASIC18.47■□□□□ 0.55
HMGCLP35914 AC009065.1-201ENST00000564055 1225 ntBASIC18.47■□□□□ 0.55
HMGCLP35914 AC010240.3-201ENST00000607688 395 ntBASIC18.47■□□□□ 0.55
HMGCLP35914 AC139887.4-201ENST00000607877 719 ntBASIC18.47■□□□□ 0.55
HMGCLP35914 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLP35914 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLP35914 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLP35914 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.47■□□□□ 0.55
HMGCLP35914 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HMGCLP35914 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLP35914 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
HMGCLP35914 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLP35914 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLP35914 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms