Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.12■□□□□ 0.33
ABCD3P28288 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ABCD3P28288 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ABCD3P28288 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ABCD3P28288 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ABCD3P28288 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.12■□□□□ 0.33
ABCD3P28288 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ABCD3P28288 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ABCD3P28288 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ABCD3P28288 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ABCD3P28288 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ABCD3P28288 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ABCD3P28288 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ABCD3P28288 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.11■□□□□ 0.33
ABCD3P28288 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ABCD3P28288 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.11■□□□□ 0.33
ABCD3P28288 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ABCD3P28288 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ABCD3P28288 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ABCD3P28288 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ABCD3P28288 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ABCD3P28288 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ABCD3P28288 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ABCD3P28288 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ABCD3P28288 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ABCD3P28288 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ABCD3P28288 AP000593.1-201ENST00000393668 712 ntBASIC17.11■□□□□ 0.33
ABCD3P28288 RNF152P1-201ENST00000397754 604 ntBASIC17.11■□□□□ 0.33
ABCD3P28288 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
ABCD3P28288 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.11■□□□□ 0.33
ABCD3P28288 SEC1P-202ENST00000473944 940 ntBASIC17.11■□□□□ 0.33
ABCD3P28288 DUX4L26-201ENST00000489078 1255 ntBASIC17.11■□□□□ 0.33
ABCD3P28288 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.11■□□□□ 0.33
ABCD3P28288 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ABCD3P28288 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ABCD3P28288 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ABCD3P28288 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ABCD3P28288 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ABCD3P28288 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.11■□□□□ 0.33
ABCD3P28288 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.11■□□□□ 0.33
ABCD3P28288 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ABCD3P28288 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ABCD3P28288 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ABCD3P28288 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.11■□□□□ 0.33
ABCD3P28288 AC004408.2-201ENST00000623613 2777 ntBASIC17.11■□□□□ 0.33
ABCD3P28288 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.11■□□□□ 0.33
ABCD3P28288 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ABCD3P28288 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD3P28288 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD3P28288 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.1■□□□□ 0.33
ABCD3P28288 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.1■□□□□ 0.33
ABCD3P28288 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ABCD3P28288 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ABCD3P28288 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD3P28288 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD3P28288 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD3P28288 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD3P28288 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.1■□□□□ 0.33
ABCD3P28288 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD3P28288 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD3P28288 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD3P28288 TSPY5P-201ENST00000426936 936 ntBASIC17.1■□□□□ 0.33
ABCD3P28288 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.1■□□□□ 0.33
ABCD3P28288 AC104390.1-201ENST00000555663 520 ntBASIC17.1■□□□□ 0.33
ABCD3P28288 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.1■□□□□ 0.33
ABCD3P28288 MYC-208ENST00000641036 567 ntBASIC17.1■□□□□ 0.33
ABCD3P28288 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD3P28288 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD3P28288 AC112777.1-201ENST00000540175 1423 ntBASIC17.1■□□□□ 0.33
ABCD3P28288 KRT8P50-201ENST00000562022 1438 ntBASIC17.1■□□□□ 0.33
ABCD3P28288 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ABCD3P28288 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD3P28288 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD3P28288 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD3P28288 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD3P28288 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD3P28288 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD3P28288 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD3P28288 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD3P28288 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD3P28288 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD3P28288 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD3P28288 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ABCD3P28288 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ABCD3P28288 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.09■□□□□ 0.33
ABCD3P28288 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.09■□□□□ 0.33
ABCD3P28288 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD3P28288 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.09■□□□□ 0.33
ABCD3P28288 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.09■□□□□ 0.33
ABCD3P28288 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD3P28288 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.09■□□□□ 0.33
ABCD3P28288 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
ABCD3P28288 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ABCD3P28288 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ABCD3P28288 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD3P28288 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD3P28288 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.09■□□□□ 0.33
ABCD3P28288 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
ABCD3P28288 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD3P28288 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms